[FieldTrip] ft_preamble error for HCP Pipeline

[Schoffelen, J.M. (Jan Mathijs)]

Hi Matt,

Hard to tell without any additional information. The megconnectome code was written ~7 years ago, using a certain version of the fieldtrip code base. It is not unlikely that there are compatibility issues.
You did not provide information with respect to the FieldTrip version you are using, but my first guess would be a mismatch.

Best wishes,
Jan-Mathijs


On 23 Sep 2020, at 03:46, Winter, Matthew <mattwint at iu.edu<mailto:mattwint at iu.edu>> wrote:

Hi Everyone,

I am trying to run the megconnectome pipeline hcp_tmegconnebacic.m. However I get a list of errors:

Error using ft_preamble_init (line 42)
It seems as if the first input argument is a FieldTrip data structure, while a cfg is expected

Error in ft_preamble (line 83)
evalin('caller', full_cmd);

Error in ft_selectdata (line 80)
ft_preamble init

Error in hcp_tmegconnebasic_contrasts (line 283)
    datacntr1A=ft_selectdata(alldata1A,'rpt',sel);

Error in hcp_tmegconnebasic (line 534)
    [outStatus] = hcp_tmegconnebasic_contrasts(cfg);

It traces back to the ft_preamble_init functions when it calls another function, FjmoT6aA_stack = dbstack(‘-completenames'), and I find myself at a deadend there, I am not sure how or where the cfg is supposed to be input. Does anyone have any insights that could help me figure this out?

Best,
Matt
_______________________________________________
fieldtrip mailing list
https://mailman.science.ru.nl/mailman/listinfo/fieldtrip
https://doi.org/10.1371/journal.pcbi.1002202

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20200923/81450956/attachment.htm>