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Hi Matt,
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<div class="">Hard to tell without any additional information. The megconnectome code was written ~7 years ago, using a certain version of the fieldtrip code base. It is not unlikely that there are compatibility issues.</div>
<div class="">You did not provide information with respect to the FieldTrip version you are using, but my first guess would be a mismatch. </div>
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<div class="">Best wishes,</div>
<div class="">Jan-Mathijs</div>
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<div class="">On 23 Sep 2020, at 03:46, Winter, Matthew <<a href="mailto:mattwint@iu.edu" class="">mattwint@iu.edu</a>> wrote:</div>
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Hi Everyone,</div>
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I am trying to run the megconnectome pipeline hcp_tmegconnebacic.m. However I get a list of errors:</div>
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<o:p class=""> </o:p></div>
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Error using ft_preamble_init (line 42)<o:p class=""></o:p></div>
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It seems as if the first input argument is a FieldTrip data structure, while a cfg is expected<o:p class=""></o:p></div>
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<o:p class=""> </o:p></div>
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Error in ft_preamble (line 83)<o:p class=""></o:p></div>
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evalin('caller', full_cmd);<o:p class=""></o:p></div>
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<o:p class=""> </o:p></div>
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Error in ft_selectdata (line 80)<o:p class=""></o:p></div>
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ft_preamble init<o:p class=""></o:p></div>
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<o:p class=""> </o:p></div>
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Error in hcp_tmegconnebasic_contrasts (line 283)<o:p class=""></o:p></div>
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datacntr1A=ft_selectdata(alldata1A,'rpt',sel);<o:p class=""></o:p></div>
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<o:p class=""> </o:p></div>
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Error in hcp_tmegconnebasic (line 534)<o:p class=""></o:p></div>
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[outStatus] = hcp_tmegconnebasic_contrasts(cfg);<o:p class=""></o:p></div>
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<o:p class=""> </o:p></div>
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It traces back to the ft_preamble_init functions when it calls another function, FjmoT6aA_stack = dbstack(‘-completenames'), and I find myself at a deadend there, I am not sure how or where the cfg is supposed to be input. Does anyone have any insights that
could help me figure this out?<span class="Apple-converted-space"> </span><o:p class=""></o:p></div>
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Best,<o:p class=""></o:p></div>
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Matt<o:p class=""></o:p></div>
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<span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class="">_______________________________________________</span><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class="">fieldtrip
mailing list</span><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<a href="https://mailman.science.ru.nl/mailman/listinfo/fieldtrip" style="font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">https://mailman.science.ru.nl/mailman/listinfo/fieldtrip</a><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<a href="https://doi.org/10.1371/journal.pcbi.1002202" style="font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">https://doi.org/10.1371/journal.pcbi.1002202</a></div>
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