[FieldTrip] Markers display with topoplots

Anne Cheylus anne.cheylus at isc.cnrs.fr
Sat Dec 21 12:27:38 CET 2019


Dear Emilie,

the layout file biosemi64.lay has changed two years ago, see

https://github.com/fieldtrip/fieldtrip/commits/master/template/layout/biosemi64.lay

the new layout correctly displays Cz at the center of the topoplot.

Because of the old misleading layout, electrodes labelled as Cz, C3 and 
C4 were indeed CPz, CP3 and CP4, see

http://www.fieldtriptoolbox.org/assets/img/template/layout/biosemi64.lay.png

biosemi64.lay topoplot


All the best,

Anne

Le 20/12/2019 à 19:06, Emilie Caspar a écrit :
> Dear Community,
>
> I rerun a script that I run 2 years ago to capture my topoplots in a 
> better rendering. Visually, the markers are not positioned similarly 
> anymore (on the attached picture, you will see on the left the old 
> version and on the right the new version). The layout has not changed, 
> the script has not changed, the data are of course the same, so I am 
> confused about what would be the cause of this modification. Has the 
> function changed in the meantime?
>
> Here is the script to ask the topoplot display :
> cfg = [];
>   cfg.baseline = [-3 0];
>   cfg.baselinetype = 'absolute';
> cfg.zlim = [-1 1];
> cfg.xlim = [0 3];
> cfg.layout      = 'biosemi64.lay';
> cfg.gridscale = 600;
> cfg.marker = 'on';
> clf;
> set(gca, 'color', 'none');
> cfg.colormap = colormap('jet');
> cfg.ylim = [8 12];
> ft_topoplotTFR(cfg, GAall_TrainingRight);
>
>
> Thank you very much for the help!
>
> Emilie
>
> ---------------------------------------------
> Emilie Caspar, Ph.D
>
> CO3, Centre de Recherche Cognition et Neurosciences (CRCN), ULB
> Voice : +32 2 650 32 95
> mail : ecaspar at ulb.ac.be <mailto:ecaspar at ulb.ac.be>
> office: DB10-138
>
> Social Brain Lab, Netherlands Institute for Neuroscience (NIN), KNAW
> mail : e.caspar at nin.knaw.nl <mailto:e.caspar at nin.knaw.nl>
>
>
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> https://doi.org/10.1371/journal.pcbi.1002202

-- 
Anne CHEYLUS
Ingénieur de Recherche / Research Engineer
UMR5304 CNRS/UCBL & UMR5292 CNRS/UCBL/INSERM/UJM
Institut des Sciences Cognitives Marc Jeannerod & CRNL
67 Bd Pinel
FR 69675 BRON
(+33) (-0) 437 911 267

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