[FieldTrip] Markers display with topoplots

Emilie Caspar ecaspar at ulb.ac.be
Sat Dec 21 14:08:25 CET 2019


Thank you very much!

Emilie

---------------------------------------------
Emilie Caspar, Ph.D
 
CO3, Centre de Recherche Cognition et Neurosciences (CRCN), ULB 
Voice : +32 2 650 32 95 
mail : ecaspar at ulb.ac.be
office: DB10-138 

Social Brain Lab, Netherlands Institute for Neuroscience (NIN), KNAW
mail : e.caspar at nin.knaw.nl

> Le 21 déc. 2019 à 12:27, Anne Cheylus <anne.cheylus at isc.cnrs.fr> a écrit :
> 
> Dear Emilie,
> 
> the layout file biosemi64.lay has changed two years ago, see 
> https://github.com/fieldtrip/fieldtrip/commits/master/template/layout/biosemi64.lay <https://github.com/fieldtrip/fieldtrip/commits/master/template/layout/biosemi64.lay>
> the new layout correctly displays Cz at the center of the topoplot.
> 
> Because of the old misleading layout, electrodes labelled as Cz, C3 and C4 were indeed CPz, CP3 and CP4, see
> 
> http://www.fieldtriptoolbox.org/assets/img/template/layout/biosemi64.lay.png <http://www.fieldtriptoolbox.org/assets/img/template/layout/biosemi64.lay.png>
> 
> All the best,
> 
> Anne
> Le 20/12/2019 à 19:06, Emilie Caspar a écrit :
>> Dear Community, 
>> 
>> I rerun a script that I run 2 years ago to capture my topoplots in a better rendering. Visually, the markers are not positioned similarly anymore (on the attached picture, you will see on the left the old version and on the right the new version). The layout has not changed, the script has not changed, the data are of course the same, so I am confused about what would be the cause of this modification. Has the function changed in the meantime?
>> 
>> Here is the script to ask the topoplot display :
>> cfg = [];
>>   cfg.baseline = [-3 0];
>>   cfg.baselinetype = 'absolute';
>> cfg.zlim = [-1 1];
>> cfg.xlim = [0 3];
>> cfg.layout      = 'biosemi64.lay';
>> cfg.gridscale = 600;
>> cfg.marker = 'on';
>> clf;
>> set(gca, 'color', 'none');
>> cfg.colormap = colormap('jet');
>> cfg.ylim = [8 12];
>> ft_topoplotTFR(cfg, GAall_TrainingRight);
>> 
>> 
>> Thank you very much for the help!
>> 
>> Emilie
>> <Marker.jpg>
>> 
>> ---------------------------------------------
>> Emilie Caspar, Ph.D
>>  
>> CO3, Centre de Recherche Cognition et Neurosciences (CRCN), ULB 
>> Voice : +32 2 650 32 95 
>> mail : ecaspar at ulb.ac.be <mailto:ecaspar at ulb.ac.be>
>> office: DB10-138 
>> 
>> Social Brain Lab, Netherlands Institute for Neuroscience (NIN), KNAW
>> mail : e.caspar at nin.knaw.nl <mailto:e.caspar at nin.knaw.nl>
>> 
>> 
>> 
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>> https://doi.org/10.1371/journal.pcbi.1002202 <https://doi.org/10.1371/journal.pcbi.1002202>
> -- 
> Anne CHEYLUS
> Ingénieur de Recherche / Research Engineer
> UMR5304 CNRS/UCBL & UMR5292 CNRS/UCBL/INSERM/UJM
> Institut des Sciences Cognitives Marc Jeannerod & CRNL
> 67 Bd Pinel
> FR 69675 BRON
> (+33) (-0) 437 911 267
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