[FieldTrip] ERROR in fieldtrip sourcemodel tutorial freesurfer pipeline
James Stieger
stieg030 at umn.edu
Fri Aug 3 16:34:23 CEST 2018
Hello!
My name is James Stieger and I am a PhD student in biomedical engineering
at the University of Minnesota studying brain computer interfaces.
I have been going through the fieldtrip tutorials and I encounter the error
in the source model tutorial found here:
http://www.fieldtriptoolbox.org/tutorial/sourcemodel
I have been following the pipeline outlined on the web page and typically
receive the notification:
recon-all -s Subject01 finished without error
However, when executing the command:
recon-all -finalsurfs -subjid Subject01
I receive the following errors in the recon-all.log:
mris_convert --volume Subject01 lh
.../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.volume
MRISread(.../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.white): could
not open file
No such file or directory
ERROR: vertexvol
mris_convert --volume Subject01 lh
.../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.volume
and in the surf error.log:
MRISread(.../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.white): could
not open file
however the command
recon-all -white -subjid Subject01
also finished without error.
Can someone help?
James
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