<div dir="ltr">Hello!<div><br></div><div>My name is James Stieger and I am a PhD student in biomedical engineering at the University of Minnesota studying brain computer interfaces.</div><div><br></div><div>I have been going through the fieldtrip tutorials and I encounter the error in the source model tutorial found here: <a href="http://www.fieldtriptoolbox.org/tutorial/sourcemodel">http://www.fieldtriptoolbox.org/tutorial/sourcemodel</a></div><div><br></div><div>I have been following the pipeline outlined on the web page and typically receive the notification:</div><div><br></div><div>
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<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;font-stretch:normal;font-size:12px;line-height:normal;font-family:"Andale Mono";color:rgb(0,249,12);background-color:rgba(0,0,0,0.85)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures">recon-all -s Subject01 finished without error</span></p>
<br></div><div>However, when executing the command:</div><div><br></div><div>
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<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;font-stretch:normal;font-size:12px;line-height:normal;font-family:"Andale Mono";color:rgb(0,249,12);background-color:rgba(0,0,0,0.85)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures">recon-all -finalsurfs -subjid Subject01</span></p>
<br></div><div>I receive the following errors in the recon-all.log:</div><div><div>mris_convert --volume Subject01 lh .../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.volume</div><div><br></div><div>MRISread(.../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.white): could not open file</div><div>No such file or directory</div><div><br></div><div>ERROR: vertexvol</div><div><br></div><div>mris_convert --volume Subject01 lh .../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.volume</div></div><div><br></div><div><br></div><div>and in the surf error.log:</div><div>MRISread(.../fieldtrip/Tutorial/FreeSurfer/Subject01/surf/lh.white): could not open file<br></div><div><br></div><div>however the command </div><div>
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<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-weight:normal;font-stretch:normal;font-size:12px;line-height:normal;font-family:"Andale Mono";color:rgb(0,249,12);background-color:rgba(0,0,0,0.85)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures">recon-all -white<span class="gmail-Apple-converted-space"> </span>-subjid Subject01</span></p>
<br></div><div>also finished without error.</div><div><br></div><div>Can someone help?</div><div>James</div></div>