[FieldTrip] source statistics - spm_bwlabel error
Malgorzata Wislowska
malgorzata.wislowska at gmail.com
Wed May 24 16:34:17 CEST 2017
Dear FT-community,
when calculating cluster permutation statistics on the source level, I
receive the following error:
Error using spm_bwlabel
spm_bwlabel: CONN must be 6, 18 or 26
Error in clusterstat (line 319)
[negclusrnd, negrndnum] = spm_bwlabel(tmp, 2*numdims); % use
spm_bwlabel for 2D/3D to avoid usage of image toolbox
Error in ft_statistics_montecarlo (line 347)
[stat, cfg] = clusterstat(cfg, statrand, statobs);
Error in ft_sourcestatistics (line 218)
[stat, cfg] = statmethod(cfg, dat, design);
I used MNE method for the inverse problem. I have 8196 grid points 1555
time points.
But the error occurs also when I average across the time.
Here is my configuration structure for the source analysis:
design = zeros(2, nb_of_sbj*2);
design(1,:) = [1:nb_of_sbj 1:nb_of_sbj];
design(2,:) = [ones(1,nb_of_sbj) ones(1,nb_of_sbj)*2];
cfg = [];
cfg.method = 'montecarlo';
cfg.statistic = 'ft_statfun_depsamplesT';
cfg.parameter = 'pow';
cfg.correctm = 'cluster';
cfg.clusterstatistic = 'maxsum';
cfg.design = design;
cfg.ivar = 2;
cfg.uvar = 1;
cfg.numrandomization = 5000;
cfg.tail = 0;
cfg.alpha = 0.025;
[stat] =
ft_sourcestatistics(cfg,avg_con_sel{:},avg_incon_sel{:});
As far as I can see somebody had asked the same question last year, but the
post doesn't seem to have been addressed:
https://mailman.science.ru.nl/pipermail/fieldtrip/2016-August/010762.html
Thank you for your help in advance.
Best regards,
Malgorzata Wislowska,
University of Salzburg
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