[FieldTrip] Problem reading .mgz files

[Ion Lavado]

Forget to mention, after this commands on freesurfer:

recon-all -talairach -subjid Subject01
recon-all -nuintensitycor -subjid Subject01
recon-all -normalization -subjid Subject01
cp T1.mgz brainmask.mgz
recon-all -gcareg -subjid Subject01
recon-all -canorm -subjid Subject01
recon-all -careg -subjid Subject01
recon-all -calabel -subjid Subject01
recon-all -normalization2 -subjid Subject01
recon-all -segmentation -subjid Subject01
recon-all -fill -subjid Subject01


I have the mri folder with the tmp folder in it but it is empty...

Thank you.

2012/1/13 Ion Lavado <lavado at gmail.com>

> Hello, i'm trying source reconstruction using Minimum-Norm Estimates and i
> have a problem when reading the (filled.mgz) or any other .mgz file after
> using Freesurfer and created the files.
> This is the ERROR i get:
>
>
> >> mri=ft_read_mri('F:\SUBJECT29_BUENO\Subject29\mri\filled.mgz');
> The system cannot find the path specified.
> ERROR: could not open /tmp/tmp7914012.mgh for reading
> ERROR: loading F:\SUBJECT29_BUENO\Subject29\mri\filled.mgz as MGH
> ??? Attempt to reference field of non-structure array.
> Error in ==> ft_read_mri at 248
>   ndims = numel(size(tmp.vol));
>
> Hope anyone can help me. Thanks!
>
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