[FieldTrip] mesh realignment
Dr N.E. Adams
nea26 at cam.ac.uk
Mon Apr 13 10:07:02 CEST 2020
Dear Fieldtrip Community
I would like to align two brain meshes and I can't figure out how.
Specifically, I would like to align a MEG-coregistered segmented brain
mesh that has been normalized (mesh_brain) to an atlas cortical mesh
(mesh_atlas). The two meshes, in this example, are about 20mm off
alignment with each other in the rostral-caudal dimensnion in the
attached images and I'd like to correct for this sort of alignment
issue.
Can I do this with ft_volumerealign()? If I can, I can't figure out the
settings.
Attempted workaround:
I tried using icp() to get the affine to tranform one to the other, but
I do not know how to then apply this affine to meshes rather than
volumes, nor if this has worked. I tried converting the mesh to a
volume, but this was only partially successful and I'm unclear how to
convert it back. Thinking this was a rabbit-hole I thought there must be
an easier solution. Anyone know?
Thank you in advance for you help
Natalie Adams
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