[FieldTrip] flipped sourceplot

Elena Krugliakova krugliakova.es at gmail.com
Thu Jun 21 15:17:47 CEST 2018


Dear Jan-Mathijs,

Thank you for your answer, it helped!

But additionally I needed to interpolate atlas on the resliced mri,
otherwise ft_sourceparcellate gave me an error "*the source positions are
not consistent with the parcellation*".

Best,
Elena

On 21 June 2018 at 11:43, Schoffelen, J.M. (Jan Mathijs) <
jan.schoffelen at donders.ru.nl> wrote:

> Hi Elena,
>
> I guess that any graphics editing program (like adobe illustrator, or even
> windows paint) can flip the figure for you. :)
> If you want to do this prior to generating the figure, you can cal
> ft_volumereslice on your anatomical image. Provided the coordinate system
> attached to the volume is right handed, right will be right and left will
> be left, after reslicing.
>
> Best wishes,
> Jan-Mathijs
>
> On 21 Jun 2018, at 11:23, Elena Krugliakova <krugliakova.es at gmail.com>
> wrote:
>
> Dear FieldTrip users,
>
> I am trying to plot my source localisation results on parcelled brain
> following this tutorial:
> http://www.fieldtriptoolbox.org/tutorial/salzburg#plot_
> the_result_in_parceled_brain_space
>
> Similarly to the figure in tutorial I get plot with inverted left-right
> axis (left appears on the right and right on the left). I guess this is
> related to the transformation matrix of* template_mri* that is used for
> interpolation of source and atlas.
>
> Is there some way to flip left and right on the sourceplot?
>
> Thanks!
>
> Elena
>
>
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