[FieldTrip] Regarding Tutorial: Preprocessing and averaging of multi-channel NIRS data

Sunny p sunnypitt1965 at gmail.com
Wed Jul 25 14:22:33 CEST 2018


Hello Sophie,

Thanks a lot for your clarification. This is very useful.

Sunny

On Wednesday, July 25, 2018, Arana, S.L. (Sophie) <S.Arana at donders.ru.nl>
wrote:

> Dear Sunny,
>
> the multi-channel NIRS data tutorial is currently under construction and
> will hopefully be fully available in a couple of weeks. Until then, there
> might still be some inconsistencies such as the one you have encountered.
>
> The variable you refer to is indeed missing. It refers to a filtered
> version of the data, and you can created it by running the following code
> before the epoching.
>
> cfg                 = [];
>
> cfg.hpfilter        = 'yes';
>
> cfg.hpfreq          = 0.01;
>
> data_flt            = ft_preprocessing(cfg,data_down);
>
>
> This should help you to continue with the tutorial, but please do keep in
> mind that we are currently working on it and you might encounter some other
> inconsistencies still later on.
>
>
> Best,
>
> Sophie
>
> ------------------------------
> *From:* fieldtrip [fieldtrip-bounces at science.ru.nl] on behalf of Sunny p [
> sunnypitt1965 at gmail.com]
> *Sent:* Tuesday, July 24, 2018 9:24 PM
> *To:* fieldtrip at science.ru.nl
> *Subject:* [FieldTrip] Regarding Tutorial: Preprocessing and averaging of
> multi-channel NIRS data
>
> Hello All Good Day,
>
> Hope you are doing fine,
>
> Thanks a lot for providing with fieldtrip which is really useful to
> analyze fNIRS data. I have an issue in the "Preprocessing and averaging of
> multi-channel NIRS data" tutorial. Can you please help me with this issue?
>
> Issue: In the  "Preprocessing and averaging of multi-channel NIRS data"
> tutorial " http://www.fieldtriptoolbox.org/tutorial/nirs_multichannel
>
> The "Epoch" section consists of a variable "data_flt.fsample" where
> "data_flt" variable is not defined. Can you please inform what is this
> variable related to? as this is needed to complete my analysis.
>
>
>
>
> Thanks for your understanding and support
>
> Best Regards,
> Sunny
>
>
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