[FieldTrip] Source localization of MEG resting state data
최미경
cmk0803 at hbf.re.kr
Mon Jun 1 21:31:08 CEST 2015
Dear fieldtrip users,
I tried using DICS beamforming on MEG resting state data of healthy
controls.
(e.g. no task, no baseline, eyes opened)
I analyzed to localize oscillatory sources using beamformer techniques
according to the following tutorial.
(link: http://www.fieldtriptoolbox.org/tutorial/beamformer)
However, the output image was weird to be considered as resting data. I
would like someone to help me through source localization procedure.
*Q1. Is there something wrong in my script as below? *
cfg = [];
cfg.output = 'powandcsd';
cfg.method = 'mtmfft';
cfg.foilim = [8 12];
cfg.tapsmofrq = 2;
cfg.channel = {'MEG'};
cfg.keeptrials = 'yes';
fft_rest = ft_freqanalysis(cfg, data_clean); % resting state MEG data
(after preprocessing)
%% Computing the leadfield matrices
cfg = [];
cfg.grad = fft_rest.grad;
cfg.vol = vol; % head model
cfg.grid = grid; % source model
cfg.keeptrials = 'yes';
cfg.normalize = 'yes';
cfg.channel = {'MEG'};
rest_grid = ft_prepare_leadfield(cfg);
%% Source analysis
cfg = [];
cfg.frequency = 'all';
cfg.grad = fft_rest.grad;
cfg.method = 'dics';
cfg.grid = rest_grid;
cfg.vol = vol;
cfg.keeptrials = 'yes';
cfg.keepfilter = 'yes';
cfg.dics.lambda = 0;
cfg.dics.projectnoise = 'yes';
rest_source = ft_sourceanalysis(cfg, fft_rest);
mri_slice = ft_volumereslice([], mri) %mri: volumesegmented mri
cfg = [];
cfg.parameter = 'avg.pow';
rest_sointer = ft_sourceinterpolate(cfg, rest_source, mri_slice);
*Q2. Is there any way to check whether the beamforming is performed well?*
Any help would be greatly appreciated.
MK CHOE
--
Mi Kyung CHOE
Department of Brain & Cognitive Sciences, Seoul National University
Human Brain Function Laboratory
E-mail : cmk0803 at hbf.re.kr, cmk0803 at meg.re.kr
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