[FieldTrip] help - tiny axis labels is making analysis impossible
Robert Oostenveld
r.oostenveld at donders.ru.nl
Fri Jul 17 11:47:37 CEST 2015
Hi Carolyn
This was also reported here http://bugzilla.fieldtriptoolbox.org/show_bug.cgi?id=2203 and in some related reports. Since screen size and resolution differs so much, I have just made some changes to ft_databrowser to allow users to specify the fontsize as a cfg option. You will be able to download the latest version of the code ((including this change) tonight.
best regards,
Robert
On 17 Jul 2015, at 00:49, Carolyn McNabb (FMHS Pharmacy) <c.mcnabb at auckland.ac.nz> wrote:
> Dear Fieldtrip,
>
> My colleagues and I have recently started learning how to use fieldtrip and are finding it very helpful; however, we are all experiencing the same issue.
>
> When we use ft_databrowser to open our channel data for artefact rejection, the channel labels are so tiny, that we cannot work with them. This has happened on 5 computers, including windows and debian (linux). Do you know if this can be fixed?
>
> The error messages are printed below - along with a screen shot of the figure. I have attached the script we used to get this figure as well.
>
> Any help would be incredibly appreciated, as without it, we are unable to run our analysis.
>
> Many thanks!
>
> Carolyn McNabb
>
> <Screenshot-1.png>
>
>
>
> >> LTP_analysis1
> Warning: assuming a head radius of 85 mm
> > In ft_read_sens (line 356)
> In LTP_analysis1 (line 20)
>
> elec =
>
> chanpos: [67x3 double]
> elecpos: [67x3 double]
> label: {67x1 cell}
> type: 'eeg1010'
> unit: 'cm'
>
> Warning: Multiple versions of spm on your path will confuse FieldTrip
> > In ft_warning (line 181)
> In ft_defaults>checkMultipleToolbox (line 263)
> In ft_defaults (line 96)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: one version of spm is found here:
> /home/cmcn018/EEG/fieldtrip-20150714/external/spm2/spm.m
> > In ft_defaults>checkMultipleToolbox (line 266)
> In ft_defaults (line 96)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: one version of spm is found here:
> /home/cmcn018/EEG/fieldtrip-20150714/external/spm8/spm.m
> > In ft_defaults>checkMultipleToolbox (line 266)
> In ft_defaults (line 96)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: You probably used addpath(genpath('path_to_fieldtrip')), this can lead to
> unexpected behaviour. See
> http://fieldtrip.fcdonders.nl/faq/should_i_add_fieldtrip_with_all_subdirectories_to_my_matlab_path
> > In ft_warning (line 181)
> In ft_defaults>checkMultipleToolbox (line 269)
> In ft_defaults (line 96)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_defaults (line 132)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_defaults (line 132)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_defaults (line 132)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_defaults (line 137)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_defaults (line 137)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_defaults (line 137)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 227)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 227)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 227)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 232)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 232)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 232)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 233)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 233)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 233)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 234)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 234)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 234)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function iscolumn has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 235)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isrow has the same name as a MATLAB builtin. We suggest you rename the
> function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 235)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> Warning: Function isequaln has the same name as a MATLAB builtin. We suggest you rename
> the function to avoid a potential name conflict.
> > In path (line 109)
> In addpath (line 86)
> In ft_hastoolbox>myaddpath (line 494)
> In ft_hastoolbox (line 408)
> In ft_defaults (line 235)
> In ft_prepare_layout (line 92)
> In LTP_analysis1 (line 23)
> creating layout from cfg.elec
> creating layout for eeg1010 system
> the call to "ft_prepare_layout" took 1 seconds and required the additional allocation of an estimated 0 MB
> evaluating trialfunction 'ft_trialfun_general'
> reading the events from '/home/cmcn018/EEG/EEG/LTP_Test.vhdr'
> found 242 events
> created 240 trials
> the call to "ft_definetrial" took 1 seconds and required the additional allocation of an estimated 0 MB
> processing channel { 'Fp1' 'Fp2' 'F7' 'F3' 'Fz' 'F4' 'F8' 'FC5' 'FC1' 'FC2' 'FC6' 'T7' 'C3' 'Cz' 'C4' 'T8' 'TP9' 'CP5' 'CP1' 'CP2' 'CP6' 'TP10' 'P7' 'P3' 'Pz' 'P4' 'P8' 'PO9' 'O1' 'Oz' 'O2' 'PO10' 'AF7' 'AF3' 'AF4' 'AF8' 'F5' 'F1' 'F2' 'F6' 'FT9' 'FT7' 'FC3' 'FC4' 'FT8' 'FT10' 'C5' 'C1' 'C2' 'C6' 'TP7' 'CP3' 'CPz' 'CP4' 'TP8' 'P5' 'P1' 'P2' 'P6' 'PO7' 'PO3' 'POz' 'PO4' 'PO8' 'VEOG' 'HEOG' }
> reading and preprocessing
> reading and preprocessing trial 240 from 240
>
> the call to "ft_preprocessing" took 2 seconds and required the additional allocation of an estimated 79 MB
> the input is raw data with 66 channels and 240 trials
> detected 0 visual artifacts
> the input is raw data with 66 channels and 240 trials
> showing a summary of the data for all channels and trials
> computing metric [--------------------------------------------------------\]
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
>
> Error using matlab.graphics.Graphics/set
> The UIContextMenu's parent figure is not the same as the parent figure of this object
>
> Error in ft_select_range (line 145)
> set(findobj(handle,'hittest','on'), 'uicontextmenu',hcmenu);
>
> Error using waitfor
> Error while evaluating Figure WindowButtonMotionFcn
> <eeg_script>_______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip
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