[FieldTrip] How to read .dicom format using FT_READ_MRI

[Ying Li]

Dear all,

I'm trying to load MRI into matlab. The MRI data I have is a series of
.dicom files (~250 frames, "IMG1"~"IMG250").  I'm wondering how to specify
the input parameter for the function "ft_read_mri". Since I have 250 files,
which file should I use for the input?

If I only use the first file "IMG1", for example mri = ft_read_mri('IMG1');
 Then I will get the following error:

Warning: Not enough data imported.  Attempted to read 3053459760 bytes at
position 2953.  Only read 534544.
ERROR: IMG1 does not have a series number
Error in load_dicom_series (line 42)
if(nargin < 1 | nargin > 3)

Output argument "vol" (and maybe others) not assigned during call to
"XX\fieldtrip_20140518\external\freesurfer\load_dicom_series.m>load_dicom_series".

Error in ft_read_mri (line 287)
  [img,transform,hdr,mr_params] = load_dicom_series(dcmdir,dcmdir,filename);

I'll appreciate your reply a lot!

Best,

Ying
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20150114/999d7b78/attachment-0001.html>