[FieldTrip] ft_neighbourplot

["Jörn M. Horschig"]

Dear Marco,

thanks for reporting this, I will have a look to see what is going wrong 
there. I'll let you know when I found the cause for your problem.

Best regards,
Jörn

On 11/10/2011 12:31 PM, Marco Buiatti wrote:
> Dear Fieldtrippers,
>
> I have a problem with ft_neighbourplot.
>
> Data from Neuromag 306 channels. Running on Linux 64 bits, Matlab version 7.12.0
>
> Neighbours in the Fieldtrip layout seem ok to me.
>
> However, when plotting them with ft_neighbourplot, the layout is
> clearly incorrect, it includes only about one third of the channels
> and when clicking on single channels, the output is incorrect (it
> always displays the same channel labels).
>
> I think this is a very useful command, so I would like to be able to use it!
>
> Below I have copied the corresponding commands.
>
> Am I doing anything wrong? Any help?
>
> Thanks
>
> Marco
>
>>> data
> data =
>
>            hdr: [1x1 struct]
>          label: {306x1 cell}
>           time: {1x300 cell}
>          trial: {1x300 cell}
>        fsample: 1000
>     sampleinfo: [300x2 double]
>      trialinfo: [300x1 double]
>           grad: [1x1 struct]
>            cfg: [1x1 struct]
>
>>> cfg=[]; cfg.method='template'; cfg.template='/neurospin/local/fieldtrip/template/neighbours/neuromag306mag_neighb.mat';
>>> neighbours = ft_prepare_neighbours(cfg, data)
> Trying to load sensor neighbours from a template
> Successfully loaded neighbour structure from
> /neurospin/local/fieldtrip/template/neighbours/neuromag306mag_neighb.mat
> there are on average 6.9 neighbours per channel
> the call to "ft_prepare_neighbours" took 0 seconds and an estimated 0 MB
>
> neighbours =
>
> 1x104 struct array with fields:
>     label
>     neighblabel
>
>>> cfg=[];cfg.neighbours=neighbours;
>>> ft_neighbourplot(cfg,data)
> Using the gradiometer configuration from the dataset.
> the call to "ft_neighbourplot" took 1 seconds and an estimated 0 MB
> Selected channel MEG1941, which has 10 neighbours: MEG0121, MEG0131,
> MEG0141, MEG0341
> Selected channel MEG2411, which has 9 neighbours: MEG0121, MEG0131,
> MEG0141, MEG0341
> Selected channel MEG2411, which has 9 neighbours: MEG0121, MEG0131,
> MEG0141, MEG0341
> Selected channel MEG2131, which has 6 neighbours: MEG0121, MEG0131,
> MEG0141, MEG0341
> Selected channel MEG2211, which has 6 neighbours: MEG0121, MEG0131,
> MEG0141, MEG0341
>


-- 
Jörn M. Horschig
PhD Student
Donders Institute for Brain, Cognition and Behaviour
Centre for Cognitive Neuroimaging
Radboud University Nijmegen
Neuronal Oscillations Group

P.O. Box 9101
NL-6500 HB Nijmegen
The Netherlands

Contact:
E-Mail: jm.horschig at donders.ru.nl
Tel:    +31-(0)24-36-68493
Web: http://www.ru.nl/donders

Visiting address:
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