[FieldTrip] Question about SPM brain templates including the cerebellum

jan-mathijs schoffelen jan.schoffelen at donders.ru.nl
Fri Apr 22 09:30:58 CEST 2011

Dear May,

The surface files contain only a triangulation of the neo-cortical  
Typically, software packages creating high-resolution meshes of the  
brain (such as freesurfer) exclude the cerebellum.
For the figures in the famous Schoffelen et al 2008 paper (Neuroimage)  
I created the surfaces (with cerebellum) using a segmented template  
MRI (using SPM) and then, after some image processing (smoothing  
filling etc), called the matlab isosurface function. This gives a  
triangulated surface which can be used for visualization. Note that  
this procedure does not yield topologically a sphere, so it cannot be  
used for inflation.



On Apr 21, 2011, at 2:27 PM, May (Heng-Ru May TAN) wrote:

> Hi
> I was wondering if there exists within the folders of Fieldtrip,  
> surface source-plot MRI templates which includes the cerebellum, and  
> if not, how could one create a template which consists of the  
> cerebellum, too?
> Any help would be gratefully appreciated!
> Thanks.
> May
> _______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip

Dr. J.M. (Jan-Mathijs) Schoffelen
Donders Institute for Brain, Cognition and Behaviour,
Centre for Cognitive Neuroimaging,
Radboud University Nijmegen, The Netherlands
J.Schoffelen at donders.ru.nl
Telephone: 0031-24-3614793

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