problems making a template grid
Andreas Wollbrink
a.wollbrink at UNI-MUENSTER.DE
Thu Apr 15 18:05:04 CEST 2010
Hi Arjen,
thank you for your help.
Regards,
Andreas
On 04/14/10 10:36, a.stolk at fcdonders.ru.nl wrote:
> Hi Andreas,
>
> With recpect to your third question:
>
> http://fieldtrip.fcdonders.nl/faq/matlab_does_not_see_the_functions_in_the_private_directory
>
> Regards,
> Arjen
>
> ----- Original Message -----
> From: "Andreas Wollbrink"<a.wollbrink at UNI-MUENSTER.DE>
> To: FIELDTRIP at NIC.SURFNET.NL
> Sent: Wednesday, April 14, 2010 10:21:10 AM GMT +01:00 Amsterdam / Berlin / Bern / Rome / Stockholm / Vienna
> Subject: [FIELDTRIP] problems making a template grid
>
> Hi all,
>
> I encountered some problems generating a template source grid as
> described in the fieldtrip example matlab script 'Create MNI-aligned
> grids in individual head-space':
>
> 1. in chapter 'Make the template_grid': Without defining a template
> image in the cfg structure prior to use ft_volumesegment the default
> setting cfg.template = '/home/common/matlab/spm2/templates/T1.mnc' is
> used. Since this file might not exist in this specific folder on a
> personal computer the function fails.
> After defining cfg.template I succeed in using the function.
> It might be helpful for others to add this comment to the example script.
>
> 2. My question at this point is: Should one use the individual template
> 'single_subj_T1.mnc' or the average template 'T1.mnc' to segment the
> template brain and construct a volume conduction model?
>
> 3. Furtheron the function 'prepare_dipole_grid' could not be found. This
> functions is placed in the private folder under fieldtrip. How can I
> automatically add this folder to my matlab path?
>
> Thanks,
> Andreas
>
--
======================================================================
Andreas Wollbrink, Biomedical Engineer
Institute for Biomagnetism and Biosignalanalysis
Muenster University Hospital
Malmedyweg 15 phone: +49-(0)251-83-52546
D-48149 Muenster fax: +49-(0)251-83-56874
Germany
e-Mail: a.wollbrink at uni-muenster.de
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