SPM2 related error message when doing volumesegment
Y Chen
ychen at BME.UFL.EDU
Tue Apr 17 18:14:40 CEST 2007
Sammeer,
Thanks for the kind help. After I defined the full path to T1.mnc file, it
still crashed. Here is what I am doing:
mri = read_fcdc_mri('Subject01.mri');
cfg = [];
cfg.template = 'D:\mat\toolbox\spm2\templates\T1.mnc';
cfg.name = 'segment';
cfg.write = 'yes';
cfg.coordinates = 'ctf';
[segmentedmri] = volumesegment(cfg, mri);
The error message is:
??? Error using ==> spm_vol>subfunc1
Can't get volume information
for '/home/common/matlab/spm2/templates/T1.mnc'
Error in ==> spm_vol>subfunc2 at 51
V = subfunc1(P);
Error in ==> spm_vol at 37
V = subfunc2(P);
Error in ==> spm_segment>get_affine_mapping at 226
if ~isempty(VG) & ischar(VG), VG = spm_vol(VG); end;
Error in ==> spm_segment>init_sp at 567
MM = get_affine_mapping(VF,PG,flags.affreg);
Error in ==> spm_segment at 91
SP = init_sp(flags.estimate,VF,PG);
Error in ==> volumesegment at 235
spm_segment(Va,cfg.template,flags);
Error in ==> vol_singleshell at 8
[segmentedmri] = volumesegment(cfg, mri);
What wrong I did? Further help is very much appreciated.
Chen
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