issues with clusterrandanalysis
Andre Bastos
abastos at BERKELEY.EDU
Mon Apr 9 06:11:53 CEST 2007
Dear Fieldtrippers,
I am beginning to use the clusterrandanalysis function, but have not been
finding any significant clusters in my EEG data. I changed alpha and
alphathresh to be 0.5, but this still didn't produce any results
(posclusters and negclusters are both empty). To test whether the config
settings were actually working, I generated some random time frequency data
using the following commands:
s = size(TFR.powspctrm (s is 17 trials by 64 channels by 40 freqs by 99 time
steps)
rpow = rand(s); (produces pseudorandom nums between 0 and 1)
TFR.powspctrm = rpow;
I reran clusterrandanalysis with this new TFR, but still got no clusters.
This puzzles me, because a random series of numbers should be statistically
different from physiologically produced spectral data.
I used the basic config settings found in the tutorial, which were:
cfg.statistic = 'indepsamplesT';
cfg.alphathresh = 0.5;
cfg.makeclusters = 'yes';
cfg.minnbchan = 2;
cfg.clusterteststat = 'maxsum';
cfg.onetwo = 'twosided';
cfg.alpha = 0.5;
cfg.nranddraws = 100;
cfg.channel = 'all';
[clusrand] = clusterrandanalysis(cfg, TFR1, TFR2);
Any ideas what I am doing wrong?
Thanks,
Andre
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