[FieldTrip] problem in importing my data in fieldtrip

Moumita bhowmick bhowmickmoumita1 at gmail.com
Mon Jun 20 14:34:29 CEST 2022


Hello everyone,
Just to inform you that my problem has been resolved. The code that I tried
this time was:

cfg = [];
cfg.dataset = 'F:\data_fldtrp\1_MD_1_edtd.mff';
cfg.trialdef.eventtype = '?';
ft_definetrial(cfg);

I think fieldtrip doesn't recognize the .set file. It worked well with
.mff.

On Mon, Jun 20, 2022 at 4:24 PM Moumita bhowmick <bhowmickmoumita1 at gmail.com>
wrote:

> Hello Eva,
> Thanks for your reply. I mistakenly typed differently for the email. Let
> me write it again.
>
> I am trying to import continuous data into the fieldtrip for
> ft_preprocessing. Since I need to do ft_definetrial first for which I need
> to know the eventtype and eventvalues first, I tried calling ft_definetrial
> with cfg.dataset.
>
>
> 1) I gave the following command:
>
> cfg = [];
>
> cfg.dataset = '1_MD_1_edtd.set';
> cfg.trialdef.eventtype = '?';
> ft_definetrial(cfg);
>
>
>
> But I am getting the following error:
>
> Error using ft_trialfun_show (line 56)
>
> file or directory '1_MD_1_edtd.set' does not exist
>
> Error in ft_definetrial (line 199)
>  [trl, event] = feval(cfg.trialfun, cfg);
>
>
> 2) I then tried specifying the filepath with the following command:
>
> cfg = [];
> cfg.dataset = 'F:\data_fldtrp\1_MD_1_edtd.set';
> cfg.trialdef.eventtype = '?';
> ft_definetrial(cfg);
>
>  But I am still getting the same error.
>
>
>
> 3) I then tried the following (without specifying the extension .set):
>
> cfg = [];
>
> cfg.dataset = '1_MD_1_edtd';
> cfg.trialdef.eventtype = '?';
> ft_definetrial(cfg);
>
>
> In return I am getting the following:
>
> Warning: file or directory "1_MD_1_edtd" does not exist, could not
> determine file format
> Warning: unsupported event format "unknown"
> no events were found in the data
> no trials have been defined yet, see FT_DEFINETRIAL for further help
> found 0 events
> the call to "ft_definetrial" took 0 seconds
>
>
> 4) I tried following your suggestion. Did you mean the following?
>
> cfg = [];
> addpath('F:\data_fldtrp');
> cfg.dataset = '1_MD_1_edtd.set';
> cfg.trialdef.eventtype = '?';
> ft_definetrial(cfg);
>
> For which I got the following error:
>
> Error using ft_trialfun_show (line 56)
> file or directory '1_MD_1_edtd.set' does not exist
>
> Error in ft_definetrial (line 199)
>     [trl, event] = feval(cfg.trialfun, cfg);
>
>
> 5) I then tried the following:
>
> addpath('F:\data_fldtrp');
> cfg = [];
> cfg.dataset = '1_MD_1_edtd.set';
> cfg.trialdef.eventtype = '?';
> ft_definetrial(cfg);
>
> I am getting the same error.
>
>
> How to write cfg.dataset = 'F:\data_fldtrp\1_MD_1_epochs.set'; so that
> fieldtrip can find the file? Why does it keep on saying 'the file does not
> exist'?
>
> On Mon, Jun 20, 2022 at 4:05 PM Eva Masson <eva.masson at hotmail.fr> wrote:
>
>> Hi Moumita,
>>
>>
>>
>> Maybe try to add the path before, adding a line like :
>>
>>
>>
>> addpath(‘F:\data_fldtrp’)
>>
>>
>>
>> Then you should be able to call your dataset with the first set of
>> commands your wrote.
>>
>> I hope this helps.
>>
>> Alternatively, the second option you mentionned should also work, but the
>> file you are calling is not the same in the two examples.
>>
>>
>>
>> Best,
>>
>> Éva
>>
>>
>>
>>
>>
>> *De : *Moumita bhowmick via fieldtrip <fieldtrip at science.ru.nl>
>> *Envoyé le :*lundi 20 juin 2022 12:20
>> *À : *fieldtrip at science.ru.nl
>> *Cc : *Moumita bhowmick <bhowmickmoumita1 at gmail.com>
>> *Objet :*[FieldTrip] problem in importing my data in fieldtrip
>>
>>
>>
>> Hello,
>>
>> I am a novice in fieldtrip. Trying to learn it for my EEG analysis, on my
>> own. I don't have any local group with whom I can discuss the problems I am
>> facing here. I am trying to import continuous data into the fieldtrip for
>> ft_preprocessing. Since I need to do ft_definetrial first for which I need
>> to know the eventtype and eventvalues first, I tried calling ft_definetrial
>> with cfg.dataset.
>>
>> I gave the following command:
>>
>> cfg = [];
>>
>> cfg.dataset = '1_MD_1_edtd.set';
>> cfg.trialdef.eventtype = '?';
>> ft_definetrial(cfg);
>>
>>
>>
>> But I am getting the following error:
>>
>> Error using ft_trialfun_show (line 56)
>>
>> file or directory '1_MD_1_edtd.set' does not exist
>>
>> Error in ft_definetrial (line 199)
>>  [trl, event] = feval(cfg.trialfun, cfg);
>>
>>
>>
>> I then tried specifying the filepath with the following command:
>>
>> cfg = [];
>> cfg.dataset = 'F:\data_fldtrp\1_MD_1_epochs.set';
>> cfg.trialdef.eventtype = '?';
>> ft_definetrial(cfg);
>>
>>
>>
>> But I am still getting the same error. How to write cfg.dataset =
>> 'F:\data_fldtrp\1_MD_1_epochs.set'; so that fieldtrip can find the file?
>>
>>
>>
>> Will be highly obliged if you can help me understand how to import data
>> into fieldtrip.
>>
>> Thanking you,
>>
>> Moumita
>>
>> --
>>
>> Moumita Bhowmick
>>
>> PhD student
>>
>> School of Cognitive Science,
>>
>> Jadavpur University
>>
>>
>>
>
>
> --
> Moumita Bhowmick
> PhD student
> School of Cognitive Science,
> Jadavpur University
>


-- 
Moumita Bhowmick
PhD student
School of Cognitive Science,
Jadavpur University
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20220620/0c7226e3/attachment.htm>


More information about the fieldtrip mailing list