[FieldTrip] Issues creating the Glasser atlas for the 8k point mesh
Paolo Belardinelli
paolo.belardinelli at gmail.com
Mon Jun 13 15:22:17 CEST 2022
Dear Fieldtrippers,
I was trying to create the Glasser atlas for the 8K mesh exactly in the
same way as it was done here for the 4K:
https://download.fieldtriptoolbox.org/tutorial/networkanalysis/
I found out that the annotation files given with the Glasser paper contain
two unuseful and not declared parcels in the corpus callosum (one each
hemisphere named "???").
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990127/
I eliminated those and tried to convert the annotation files into .gii with
R. Unfortunately, when using ft_readheadshape for merging the two different
hemispheres into one cortical sheet, I receive an error message that some
field is missing from the gifti file. (My plan was to then decimate the
label file with the same approach of ft_postfreesurfer script)
Can somebody give me a cue on how the file linked above was generated?
Best wishes,
Paolo
--
--
[image: Università di Trento] <http://www.unitn.it/>
Paolo Belardinelli, PhD
Center for Mind/Brain Sciences - CIMeC <https://www.cimec.unitn.it/en>
University of Trento
Via delle Regole, 101, 38123 Mattarello-Trento (TN), Italy
Phone: (+39)0461-283097
[image: facebook] <https://www.facebook.com/cimec.unitrento/>[image:
twitter] <https://twitter.com/cimec_unitrento>[image: instagram]
<https://www.instagram.com/cimec_unitrento/>[image: linkedin]
<https://www.linkedin.com/company/cimecunitrento/about/>[image: youtube]
<https://www.youtube.com/channel/UCOCqJ8qkQnZN4jQFrBNkI6A>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20220613/9c461273/attachment.htm>
More information about the fieldtrip
mailing list