[FieldTrip] Questions on Functional Connectivity results using debiased wPLI
SERGIO OSORIO GALEANO
srosorio at uc.cl
Wed Sep 15 18:00:21 CEST 2021
Dear Fieldtrip community,
I'm estimating Functional Connectivity between 100 source-reconstructed
signals using the debiased wPLI and I have a couple of questions about my
results (code snippet below).
1) Regardless of whether I use my full time window of interest (0-1.5 s) or
whether I estimate wPLI for two separate shorter time windows (0-.7 s and
.7-1.5 s), the results are always identical to one another. Is this normal
behaviour in wPLI analyses or is there something potentially wrong with how
I've implemented it?
2) I notice that wPLI values are way lower for low-frequencies (4-7hz) than
for higher-frequencies (8-12hz and 15-30hz). While this could be a real
effect associated with my task, the fact that this result is consistent
across different conditions makes me wonder whether I've done something
wrong in the ft_freqanalysis configuration.
Thanks a lot in advance for any help anyone can provide!
-----------
cfg = [ ];
data = ft_preprocessing(cfg,rwdata);
%resample data
cfg = [ ];
cfg.resamplefs = 250;
data = ft_resampledata(cfg, data);
data =
struct with fields:
fsample: 250
trial: {1×117 cell}
time: {1×117 cell}
label: {100×1 cell}
cfg: [1×1 struct]
% next, call the ft_freqanalysis function in our source data
cfg = [ ];
cfg.output = 'fourier';
cfg.method = 'mtmfft';
cfg.taper = 'dpss';
cfg.foi = linspace(4,30,30);
cfg.tapsmofrq = 4;
cfg.toi = 0:.02:1.5; % try 0:.02:.7 and .7:.02:1.5
tf_data = ft_freqanalysis(cfg,data);
tf_data =
struct with fields:
label: {100×1 cell}
dimord: 'rpttap_chan_freq'
freq: [1×30 double]
fourierspctrm: [4563×100×30 double]
cumsumcnt: [117×1 double]
cumtapcnt: [117×1 double]
cfg: [1×1 struct]
% estimate wPLI values
cfg = [ ];
cfg.method = 'wpli_debiased';
connect_data = ft_connectivityanalysis(cfg,tf_data);
connect_data =
struct with fields:
label: {100×1 cell}
dimord: 'chan_chan_freq'
wpli_debiasedspctrm: [100×100×30 double]
freq: [1×30 double]
cfg: [1×1 struct]
Best,
Sergio.
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