[FieldTrip] mMSE plotting steps

[mubeen afzal]

Thanks Jan this is great help. I have made a small proposed edit on the github page to add this code.

I am an epilepsy specialist/researcher from melbourne. Are questions like this best asked through this email as I am beginning to learn on matlab/fieldtrip for my project and may have some more?

Regards,
Mubeen J



________________________________
From: fieldtrip <fieldtrip-bounces at science.ru.nl> on behalf of Schoffelen, J.M. (Jan Mathijs) <jan.schoffelen at donders.ru.nl>
Sent: Thursday, January 28, 2021 3:45 PM
To: FieldTrip discussion list <fieldtrip at science.ru.nl>
Subject: Re: [FieldTrip] mMSE plotting steps

Hi Mubeen,

Perhaps the team that wrote the documentation might want to chime in here, but the instructions looks clear enough to me.

If you hack the output data structure into something that looks as if it is a channel level time-frequency data structure (as documented in ft_datatype_freq), you can use ft_multiplotTFR

Thus:

freq = keepfields(mmsedata,{‘label’ ’time’});
freq.dimord = ‘chan_freq_time’;
freq.freq = 1:size(mmsedata.r,2);
freq.powspctrm = mmsedata.r (or mmsedata.sampen, depending on what you want to visualize).

Please try it out, and once this works for you could you please add this to the documentation on the website?

Best wishes,
Jan-Mathijs


On 28 Jan 2021, at 06:34, mubeen afzal <mubafzal at hotmail.com<mailto:mubafzal at hotmail.com>> wrote:

Hi,

Could I get help here after running the mMSE function
this is my output
<image.png>

however i am having trouble proceeding with these instructions
<image.png>

Mubeen
_______________________________________________
fieldtrip mailing list
https://mailman.science.ru.nl/mailman/listinfo/fieldtrip<https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fmailman.science.ru.nl%2Fmailman%2Flistinfo%2Ffieldtrip&data=04%7C01%7C%7Cd6f9bc3f1f634832b19008d8c38e4b97%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637474363411626270%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=RNzT1uv%2B7jmS9atplN8R0NhW8cHtpWAyOdPFT5PB1Ng%3D&reserved=0>
https://doi.org/10.1371/journal.pcbi.1002202<https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdoi.org%2F10.1371%2Fjournal.pcbi.1002202&data=04%7C01%7C%7Cd6f9bc3f1f634832b19008d8c38e4b97%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637474363411636261%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=7Oj8z7bUjqosNjCxnuTTRF4%2FJRqGcRgmrj%2BEAi91i2o%3D&reserved=0>

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20210129/16493b56/attachment.htm>