[FieldTrip] Running out of memory (RAM)
Schoffelen, J.M. (Jan Mathijs)
jan.schoffelen at donders.ru.nl
Mon Jun 22 08:51:30 CEST 2020
Dear Andrade,
Without any more specific information, the only meaningful comment that can be given here, is ‘get yourself a more powerful computer’.
Memory usage depends highly on the operating system (in particular: matlab on windows machines used to be much less memory friendly, but it’s been a while that I have been running real computations on a window machine so perhaps this has changed), the total size of all variables that need to be kept in memory, etc.
Best wishes,
Jan-Mathijs
On 21 Jun 2020, at 22:34, Andrade Rey René <rene.andrade at edu.uah.es<mailto:rene.andrade at edu.uah.es>> wrote:
Dear experts:
I am running this code
cfg = [];
cfg.headmodel = headmodel;
cfg.sourcemodel = leadfield;
cfg.method = 'lcmv';
cfg.lcmv.projectmom = 'yes'; % project dipole time series in direction of maximal power (see below)
cfg.lcmv.kurtosis = 'yes'; % compute kurtosis at each location
source = ft_sourceanalysis(cfg, cov_matrix);
Of http://www.fieldtriptoolbox.org/tutorial/epilepsy/. And I think I run out of memory because with “top” I can see the computer stops responding when near 85% of RAM memory(16GB).
I cannot report any error because the only problem seems to be that either wrong code or wrong data or I don’t know.
Best,
Andrade.
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https://doi.org/10.1371/journal.pcbi.1002202
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