[FieldTrip] ft_plot_sens Question
Jonathon James Parker
parkerjo at stanford.edu
Tue Apr 14 03:56:03 CEST 2020
Hi Fieldtrippers:
I am trying to make a figure where I label sets of two sensors with different colors on the background of all the sensors (SEEG contacts).
For instance I would like to make two contacts red (stimulation contacts) and two contacts blue (recording contacts), with the rest of the contacts black spheres.
I attempted the following:
ft_plot_sens(electrode_map); %plots all contacts without labels in black
ft_plot_sens(electrode_map, 'label', 'on', 'fontcolor', 'b','facecolor',stim_electrode_clr,'chantype',{stimA,stimB});
ft_plot_sens(electrode_map, 'label', 'on', 'fontcolor', 'b','facecolor',rec_electrode_clr,'chantype',{RecA,RecB});
stimA, stimB, RecA, RecB are the strings for the respective channels.
I am getting the following error anytime I try to call ft_plot_sens() with fewer than three sensors….
I receive the following error:
Error using delaunay
At least three input points must be provided to define a triangular mesh.
Error in projecttri (line 83)
tri = delaunay(prj(:,1), prj(:,2));
Error in ft_plot_sens (line 303)
tri = projecttri(pos, 'delaunay');
Error in jpPlotElectrodes (line 7)
ft_plot_sens(electrode_map, 'label', 'on', 'fontcolor', 'b','facecolor',stim_electrode_clr,'chantype',{stimA,stimB});
I dug down into the implementation of ft_plot_sens() and see that it relies in the depth on a call to deuaunay(…) which looks like needs three arguments.
I attempted to “trick” the function by putting in a dummy 0,0,0 corner electrode and plotting, however, that messes with the scale of the plot.
Has anyone developed a work around for independently labeling two channels/electrodes at a time a different color?
Kindest regards. Hope everyone is staying healthy out there.
Best,
JP
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20200414/a6cd5147/attachment.htm>
More information about the fieldtrip
mailing list