[FieldTrip] correlate EEG activity and behaviour
Jason Chan
jasonseehochan at gmail.com
Mon Sep 16 13:37:30 CEST 2019
Hi Everyone,
I am trying to correlate EEG activity and memory scores. I had a look at
previous threads and while it runs, I get a “stat” full of NaNs. I am
trying to correlate a Grand Average (AVG) with cfg.keepindividuals =
‘yes’. Is this correct or should I run this on the individual data?
AVG =
powspctrm: [15×125×29×81 double]
label: {125×1 cell}
freq: [1×29 double]
time: [1×81 double]
dimord: 'subj_chan_freq_time'
cfg: [1×1 struct]
The code I am using is :
cond = AVG;
%Y is the memory scores from the 12 participants
Y = [0.883; 0.925; 0.815; 0.977; 0.904; 0.867; 0.802; 0.744; 0.727; 0.685;
0.728; 0.912];
dum = cond;
dum.powspctrm = repmat(Y,[1 size(cond.powspctrm,2) size(cond.powspctrm,3)
size(cond.powspctrm,4)]);
%here Y is a vector with the behavioral measure
cfg = [];
cfg.channel = {'F3','F4','FC1','FC2','F1','F2','FCz','Cz'};
cfg.avgoverchan= 'yes';
cfg.latency = [-0.5 2.0];
cfg.freq = [4 8];
cfg.avgoverfreq = 'yes';
cfg.avgovertime = 'no';
cfg.method = 'montecarlo';
cfg.parameter = 'powspctrm';
cfg.statistic = 'ft_statfun_correlationT';
cfg.numrandomization = 1000;
cfg.design = [];
cfg.design(1,:) = [ones(1,length(Y)) 2*ones(1,length(Y))];
cfg.design(2,:) = [1:length(Y) 1:length(Y)];
corr_stat_none_learn_P = ft_freqstatistics(cfg,cond,dum);
The results I get:
corr_stat_none_learn_P =
prob: [251×2 double]
cirange: [251×2 double]
mask: [251×2 logical]
stat: [251×2 double]
ref: [1×1×251 double]
rho: [251×2 double]
dimord: 'chan_freq_time'
freq: 15.9976
label: {'mean(F3, FC1, Cz, FC2, F4, F1, F2, FCz)'}
time: [1×251 double]
cfg: [1×1 struct]
The dimord does not seem to match the other variables. Is this ok? I only
get NaNs for the stat variable.
I am grateful for any help.
Best,
Jason
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