[FieldTrip] errors replicating Salzburg Fieldtrip tutorial
Tzvetan Popov
tzvetan.popov at uni-konstanz.de
Wed May 22 09:46:46 CEST 2019
Dear Irene,
I can not reproduce your error. The example code computes correctly. My ft_version is 20190419
Best
Tzvetan
> Am 22.05.2019 um 09:42 schrieb Irene Varela Leniz <irene.varela at alumni.mondragon.edu>:
>
> Dear Shoffelen,
>
> I am working with last Fieldtrip and MATLAB version so I'm afraid that's not the problem.
>
> Best wishes,
>
> Irene
>
> El mié., 22 may. 2019 a las 9:38, Schoffelen, J.M. (Jan Mathijs) (<jan.schoffelen at donders.ru.nl <mailto:jan.schoffelen at donders.ru.nl>>) escribió:
> Hi Irene,
>
> Please check which version of the code you are using, and update to a more recent version to FieldTrip, and try again. The line + error you report does not match the ones in the current version of Fieldtrip.
>
> Best wishes,
> Jan-Mathijs
>
>
>
>> On 22 May 2019, at 09:21, Irene Varela Leniz <irene.varela at alumni.mondragon.edu <mailto:irene.varela at alumni.mondragon.edu>> wrote:
>>
>> Dear Fieldtripers,
>>
>> I am trying to replicate the well-known tutorial:salzburg [FielTrip] (http://old.fieldtriptoolbox.org/tutorial/salzburg <http://old.fieldtriptoolbox.org/tutorial/salzburg>). Anyway, I am getting some errors that I could not manage to solve. I would be really grateful if someone could lend me a hand.
>>
>> I am working on section called "Localizing auditory evoked fields using beamforming techniques in parceled brain space". I managed to compute the sourcemodel as explained in the tutorial without any problem. But now, when "Computing the leadfield" I get an error message related with sourcemodel.inside field, which makes it impossible for me to create the leadfield. The structure is the following:
>>
>> sourcemodel =
>> struct with fields:
>> pos: [6426×3 double]
>> dim: [17 21 18]
>> unit: 'm'
>> inside: [17×21×18 logical]
>> cfg: [1×1 struct]
>>
>> The structure for computing the leadfield:
>>
>> cfg = [];
>> cfg.label = data.label;
>> cfg.elec = data.elec;
>> cfg.vol = hdm;
>> cfg.lcmv.reducerank = 2; % I am working with EEG data
>> cfg.grid = sourcemodel;
>> [grid] = ft_prepare_leadfield(cfg)
>>
>> An the error I get:
>>
>> Operands to the || and && operators must be convertible to logical scalar values.
>>
>> Error in ft_checkconfig (line 529)
>> elseif isfield(cfg, 'grid') && isfield(cfg.grid, 'inside') && any(cfg.grid.inside>1)
>>
>> Error in ft_prepare_leadfield (line 156)
>> cfg = ft_checkconfig(cfg, 'inside2logical', 'yes');
>>
>> I think the error comes from the fact that sourcemodel.inside is a 3-dimensional logical array. The operation - any(cfg.grid.inside>1) does not output a logical scalar value because sourcemodel.inside is in 3 dimensions.
>> So far I have always worked with models whose inside parameter was of one dimension. Anyway, I'm not sure if this is the problem, please correct me if I'm wrong.
>>
>> Has anyone encountered this same problem, and does anyone know how to fix it?
>>
>> Thank you very much for your attention,
>>
>>
>> Irene
>>
>>
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>
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