[FieldTrip] Problem using ft_timelockstatistics with MVPA-Light-master
D.Abdallah
da401 at kent.ac.uk
Wed Mar 27 15:01:04 CET 2019
Dear fieldtrip users,
I've downloaded and added to my path on Matlab the MVPA-Light-master toolbox. I'm using MATLAB R2014a. After preprocessing and segmenting my data I tried to run the classification accuracy following the steps in the fieldtrip MVPA Light tutorial: http://www.fieldtriptoolbox.org/tutorial/mvpa_light/
This is the code I have for the classification during the latency chosen:
%Classification in 0.5 0.7 latency
nFaces = numel(face_timelock.trial);
nVase = numel(vase_timelock.trial);
%%Define the configuration struct
cfg = [];
cfg.keeptrials = 'yes';
cfg.method = 'mvpa';
cfg.layout = 'biosemi64.lay';
cfg.mvpa.classifier = 'multiclass_lda';
cfg.mvpa.metric = 'accuracy';
cfg.mvpa.k = 5;
cfg.latency = [0.5, 0.7];
cfg.avgovertime = 'yes';
cfg.design = [ones(nFaces,1); 2*ones(nVase,1)];
stat = ft_timelockstatistics(cfg, face_timelock, vase_timelock);
When I run this bit, I keep getting this error message:
Error using ft_timelockstatistics (line 162)
could not find the corresponding function for cfg.method="mvpa"
When I look into the script for ft_timelockstatistics, this is what I find in the lines that specify what stats can be used with the cfg.method function:
% fetch function handle to the intermediate-level statistics function
statmethod = ft_getuserfun(cfg.method, 'statistics');
if isempty(statmethod)
ft_error('could not find the corresponding function for cfg.method="%s"\n', cfg.method);
else
fprintf('using "%s" for the statistical testing\n', func2str(statmethod));
end?
I am not sure what I am doing wrong. Any help/input would be very much appreciated.
Thank you!
All the best,
Diane Abdallah
Neuropsychology PhD Student, University of Kent, UK
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