[FieldTrip] Correspondence channels-coils in HCP files
François Tadel
francois.tadel at mcgill.ca
Thu May 11 12:26:31 CEST 2017
Hello,
I wrote a FieldTrip>Brainstorm import function based on Elekta files,
and I was using the .tra matrix to get the correspondence between the
channels and the coils:
https://github.com/brainstorm-tools/brainstorm3/blob/master/toolbox/io/in_data_fieldtrip.m#L107
I based this code on your description of the .tra field: "NxM matrix
with the weight of each coil into each channel":
http://www.fieldtriptoolbox.org/faq/how_are_electrodes_magnetometers_or_gradiometers_described
This doesn't work with the processed 4D recordings from the HCP dataset
because the .tra matrix is dense.
Is this because the 4D compensation matrix is integrated in this .tra
matrix? Or because there is some additional PCA/ICA projection done
during the preprocessing?
How do I recover the sparse .tra information that simply contains the
weights channels-coils from the HCP processed files?
Thanks,
François
--
François Tadel, MSc
MEG / McConnell Brain Imaging Center / MNI / McGill University
3801 rue University, Montreal, QC H3A2B4, Canada
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