[FieldTrip] Time Frequency Analysis of <1 Hz
Mick Lehmann
mick.lehmann at uzh.ch
Thu Mar 24 10:48:57 CET 2016
Dear FT community,
I'm currently analyzing sleep EEG data and therefore I'm also interested in frequency ranges around 0.5/1 Hz. However, when I plot the data, it starts only from 1.25Hz and the cluster-based permutation can't be conducted when I include frequency ranges below 1.5 Hz.
Any ideas on this issue based on the information provided blow?
Best regards,
Mick
The raw data was read using the following script:
VP = dir('*.dat');
cfg = [];
cfg.dataset = (VP.name); % dataset
cfg.trialdef.eventtype = 'Comment';
cfg.trialdef.prestim = 3;
cfg.trialdef.poststim = 5;
cfg.trialdef.eventvalue = {'HitHitReakt_LL' 'GainReakt_LL'};
cfg = ft_definetrial(cfg);
cfg.demean = 'yes';
cfg.baselinewindow = [-1 -.1];
HH_SlowOsc = ft_preprocessing(cfg);
HH_SlowOsc = renamechannels(HH_SlowOsc);
save HH_SlowOsc HH_SlowOsc
Afterwards, TF analysis was conducted using this script:
load HH_SlowOsc
cfg = [];
cfg.channel = 'all';
cfg.method = 'wavelet';
cfg.with = 2; HERE, I'VE TRIED 2 AND 7 CYCLES. BOTH DIDN'T WORK
cfg.output = 'pow';
cfg.foi = 0.5:0.5:25; % Analysis from 2 to 30 Hz in 0.5 Hz steps
cfg.toi = -3:0.05:5; % time window "slides" from -1 to 2 sec in steps of 0.05 sec (50 ms)
% cfg.keeptrials = 'yes'; % für Single Trial Analysen
TF_HH_SlowOsc = ft_freqanalysis(cfg, HH_SlowOsc);
save TF_HH_SlowOsc TF_HH_SlowOsc;
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