[FieldTrip] no red color for ft_multiplotTFR

Herring, J.D. (Jim) j.herring at donders.ru.nl
Thu Jun 4 09:21:10 CEST 2015


Dear Mante,

As a further clarification, if not specified in the configuration as mentioned by Joern, FieldTrip uses the default Matlab colormap which indeed is Parula (yellow-greenish) as opposed to Jet from MatLab 2014a onwards.

Best,

Jim

From: fieldtrip-bounces at science.ru.nl [mailto:fieldtrip-bounces at science.ru.nl] On Behalf Of Jörn M. Horschig
Sent: donderdag 4 juni 2015 8:57
To: 'FieldTrip discussion list'
Subject: Re: [FieldTrip] no red color for ft_multiplotTFR

Dear Mante,

most likely you are using a Matlab version >2014a. Mathwork changed the default colormap to Parula instead of Jet, see:
http://blogs.mathworks.com/steve/2014/10/13/a-new-colormap-for-matlab-part-1-introduction/
You can change the colormap by using the 'colormap' command in Matlab, or if I recall correctly, also set cfg.colormap= 'jet' (which is doing the same within the ft_ function)

Best,
Jörn

--

Jörn M. Horschig, Software Engineer
Artinis Medical Systems<http://www.artinis.com/>  |  +31 481 350 980

From: fieldtrip-bounces at science.ru.nl<mailto:fieldtrip-bounces at science.ru.nl> [mailto:fieldtrip-bounces at science.ru.nl] On Behalf Of NIEUWLAND Mante
Sent: Wednesday, June 3, 2015 10:38 PM
To: fieldtrip at science.ru.nl<mailto:fieldtrip at science.ru.nl>
Subject: [FieldTrip] no red color for ft_multiplotTFR


Dear all,



I'm new to Fieldtrip, so I hope this question isn't too stupid :-D. I could not find anything relevant on the previous threads.



When I use the multiplotTFR function (example code pasted below), the hot color is always yellow and never red, even if I set the zlim to extremely small values).



I am using fieldtrip-20150504. What am I doing wrong? I thought the red-blue hot-cold colors were standard. Any help is really appreciated!



Cheers,

Mante







cfg = [];

cfg.layout      = 'config/biosemi64.lay';

cfg.channel = 'all';

cfg.baseline = 'no';

cfg.xlim = [0 2];%[-0.5 1.5];%

cfg.ylim = [30 100];

cfg.zlim = [-0.1 0.1];

cfg.interactive = 'yes';

cfg.showlabels    = 'yes';

cfg.colorbar = 'yes';



figure;

ft_multiplotTFR(cfg, grandavg_hi_131_132);

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