[FieldTrip] ft_clusterplot vlim error
G Stothart
George.Stothart at bristol.ac.uk
Wed Jul 8 15:47:25 CEST 2015
Hi,
I am trying to plot the outcome of a cluster analysis of a
within-subjects time frequency analysis.
cfg = [];
cfg.layout = 'acticap32.mat';
cfg.alpha = 0.05;
cfg.parameter = 'raweffect';
ft_clusterplot(cfg, stat);
I keep receiving an error message referring to vlim, but I can't seem to
solve this.Specifically I get the following output from matlab:
reading layout from file acticap32.mat
the call to "ft_prepare_layout" took 0 seconds
There are 1 clusters smaller than alpha (0.05)
Positive cluster: 1, pvalue: 0.049505 (x)
the call to "ft_prepare_layout" took 0 seconds
Warning: The option cfg.xparam is deprecated, support is no longer
guaranteed
> In ft_checkconfig at 164
In fieldtrip-20150115\private\topoplot_common at 32
In ft_topoplotTFR at 192
In ft_clusterplot at 401
Attempted to access vlim(1); index out of bounds because numel(vlim)=0.
Error in ft_plot_vector (line 209)
if vlim(1)==vlim(2)
Error in ft_plot_topo (line 279)
ft_plot_vector(xval, yval, 'Color', 'k', 'LineWidth', 2, 'tag', tag,
'parent', parent);
Error in topoplot_common (line 769)
ft_plot_topo(chanX,chanY,dat,opt{:});
Error in ft_topoplotTFR (line 192)
[cfg] = topoplot_common(cfg, varargin{:});
Error in ft_clusterplot (line 401)
ft_topoplotTFR(cfgtopo, stat);
As requested here are the cfg and stat details.
>> display (cfg)
cfg =
layout: 'acticap32.mat'
alpha: 0.0500
parameter: 'raweffect'
>> display (stat)
stat =
prob: [33x1x25 double]
posclusters: [1x9 struct]
posclusterslabelmat: [33x1x25 double]
posdistribution: [1x100 double]
negclusters: [1x3 struct]
negclusterslabelmat: [33x1x25 double]
negdistribution: [1x100 double]
cirange: [33x1x25 double]
mask: [33x1x25 logical]
stat: [33x1x25 double]
ref: [33x1x25 double]
dimord: 'chan_freq_time'
label: {33x1 cell}
time: [1x25 double]
cfg: [1x1 struct]
raweffect: [33x34x25 double]
I have attached my layout file (acticap32.mat), my cfg and stat files.
Many thanks!
George
--
Dr George Stothart
Research Associate
School of Experimental Psychology
12a Priory Road
University of Bristol
BS8 1TU
Office: +44 (0)117 331 7894
Mobile: +44 (0)791 070 2859
http://www.bristol.ac.uk/expsych/people/george-stothart/index.html
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