[FieldTrip] MNI coordinate to Anatomy
Jörn M. Horschig
jorn at artinis.com
Thu Feb 5 11:52:27 CET 2015
you can use ft_volumelookup in Fieldtrip (ahja, Arjen beat me to it!).
You can also specify an atlas in your cfg when using ft_sourceplot, which will show the anatomical label according to that atlas.
You need to specify an atlas which is in the same coordinate system, see
http://fieldtrip.fcdonders.nl/tutorial/beamformingextended#plotting_sources_of_oscillatory_gamma-band_activity (scroll down to the exercise.
Jörn M. Horschig, Software Engineer
<http://www.artinis.com/> Artinis Medical Systems | +31 481 350 980
From: fieldtrip-bounces at science.ru.nl [mailto:fieldtrip-bounces at science.ru.nl] On Behalf Of Rajat Thomas
Sent: Thursday, February 5, 2015 11:39 AM
To: fieldtrip at science.ru.nl
Subject: [FieldTrip] MNI coordinate to Anatomy
Dear Fieldtrip users,
If I give you an MNI coordinate (in mm), is there a function (say from the SPM Anatomy toolbox) that I can use to get a label associated with that location?
(Without using the GUI)
Rajat Mani Thomas
Social Brain Lab
Netherlands Institute for Neuroscience
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