[FieldTrip] Fwd: Power Maps on Surface
Jörn M. Horschig
jorn at artinis.com
Fri Apr 3 09:23:24 CEST 2015
Hey.
You should specify cfg.surffile really as the path to the file, and not read in the content apriori. This section here might help (the ‘exercise’ part of the tutorial lists a cfg-example for surface plotting).
http://www.fieldtriptoolbox.org/tutorial/beamformingextended#plotting_sources_of_oscillatory_gamma-band_activity
Best,
Jörn
--
Jörn M. Horschig, Software Engineer
<http://www.artinis.com/> Artinis Medical Systems | +31 481 350 980
From: fieldtrip-bounces at science.ru.nl [mailto:fieldtrip-bounces at science.ru.nl] On Behalf Of Azeez Adebimpe
Sent: Thursday, April 2, 2015 5:37 PM
To: FieldTrip discussion list
Subject: Re: [FieldTrip] Fwd: Power Maps on Surface
Hello,
Your code is right I also encouter the same problem but you can project on the surface with ft_plot_mesh
ft_plot_mesh(bnd, 'vertexcolor', m);
bnd is the your source modle and m is avg.pow value
Azeez
On Thu, Apr 2, 2015 at 3:51 PM, Keyvan Mahjoory <mahjoory86 at gmail.com <mailto:mahjoory86 at gmail.com> > wrote:
Dear Fieldtrip Users,
I used the surface file "cortex_5124.surf.gii" to restrict sources on cortex. I wonder how I can plot powermaps on surface?
cfg.surffile=ft_read_headshape('cortex_5124.surf.gii');
even I save it's output in a new .mat file: "sourcemodel.mat" and tried
cgf.surffile = 'sourcemodel.mat';
in either case the function "ft_sourceplot" gives error.
cfg = [];
cfg.method = 'surface';
cfg.funparameter = 'avg.pow';
cfg.funcolormap = 'jet';
cfg.surffile='sourcemodel.mat';
ft_sourceplot(cfg, src)
In my code I have defined surface vertices and triangles, as well as power per vertex, I wonder What is wrong in my code?
Many Thanks in advance,
Best,
Keyvan
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