[FieldTrip] Mapping headmodel voxels to brain regions

"Jörn M. Horschig" jm.horschig at donders.ru.nl
Wed Sep 25 12:33:38 CEST 2013


Hi Nina,

you can use an atlas, which can be found in FieldTrip/template/atlas/
See for example:
http://fieldtrip.fcdonders.nl/tutorial/beamformingextended#plotting_sources_of_oscillatory_gamma-band_activity 
(it's an excercise in there, but you can specifiy cfg.atlas=... when 
using ft_sourceplot)

Best,
Jörn

On 9/25/2013 11:14 AM, Merkel, Nina wrote:
> Dear Arjen,
>
> thanks for the fast answer, I wonder if there is kind of a file, where 
> I can get an overview which voxel belong to which region.
> Do you know?
>
> Best,
> Nina
>
>
> ------------------------------------------------------------------------
> *Von:* fieldtrip-bounces at science.ru.nl 
> [fieldtrip-bounces at science.ru.nl]" im Auftrag von "Arjen Stolk 
> [a.stolk8 at gmail.com]
> *Gesendet:* Mittwoch, 25. September 2013 09:20
> *An:* FieldTrip discussion list
> *Betreff:* Re: [FieldTrip] Mapping headmodel voxels to brain regions
>
> Hi Nina,
>
> Perhaps you might want to have a look at 'ft_volumelookup', and this page:
>
> http://fieldtrip.fcdonders.nl/faq/how_can_i_determine_the_anatomical_label_of_a_source?
>
> best wishes,
> Arjen
>
>
> 2013/9/25 Merkel, Nina <nina.merkel at brain.mpg.de 
> <mailto:nina.merkel at brain.mpg.de>>
>
>     Dear Fieltrip users,
>
>     I am looking for a nice and easy way to map the headmodel voxels
>     to brain areas. If there are any solutions around, you could let
>     me know?
>
>     Thank you,
>     Nina
>
>     _______________________________________________
>     fieldtrip mailing list
>     fieldtrip at donders.ru.nl <mailto:fieldtrip at donders.ru.nl>
>     http://mailman.science.ru.nl/mailman/listinfo/fieldtrip
>
>
>
>
> _______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip


-- 
Jörn M. Horschig
PhD Student
Donders Institute for Brain, Cognition and Behaviour
Centre for Cognitive Neuroimaging
Radboud University Nijmegen
Neuronal Oscillations Group
FieldTrip Development Team

P.O. Box 9101
NL-6500 HB Nijmegen
The Netherlands

Contact:
E-Mail: jm.horschig at donders.ru.nl
Tel:    +31-(0)24-36-68493
Web: http://www.ru.nl/donders

Visiting address:
Trigon, room 2.30
Kapittelweg 29
NL-6525 EN Nijmegen
The Netherlands

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20130925/8b8b6768/attachment-0002.html>


More information about the fieldtrip mailing list