[FieldTrip] problem with MEG leadfield
Lilla.Magyari at mpi.nl
Lilla.Magyari at mpi.nl
Mon Mar 11 10:46:33 CET 2013
hi Sara,
I am not entirely sure of this: But I think you get the error message
because your vol structure is recognized as a concentric-spheres type
volume conduction model which is supported for EEG data, while your input
is MEG data.
You can check it here (in the reference documentation of
ft_prepare_headmodel) which headmodels are implemented for MEG:
http://fieldtrip.fcdonders.nl/reference/ft_prepare_headmodel.
Best,
Lilla
> Hi everybody
> I'm trying to generate a field for a simulated dipole using the
> command ft_dipolesimulation, for a MEG study.
>
> I do the following:
> -read the hdr
>
> -import the sensor structure with the following lines
> grad=hdr.grad;
> radius = sqrt(sum(grad.chanpos.^2,2));
> grad.chanpos = grad.chanpos./ [radius radius radius];
> grad.label=hdr.label(1:306)';
>
> -then I create the vol structure using the following code
> vol = [];
> vol.r = 12 * [0.88 0.92 1.00]; % radii of spheres, the head radius is 12
> cm
> vol.c = [1 1/80 1]; % conductivity
> vol.o = [0 0 0];
>
> At this point I have the grad structure, and the vol structure.
> Then I give all the options for the dipole simulation with the code
>
> %% create a dipole simulation with a custom timecourse
> cfg = [];
> cfg.vol = vol; % see above
> cfg.grad = grad; % see above
> cfg.dip.pos = [0 0.5 0.3];
> cfg.dip.mom = [1 0 0]';
> cfg.dip.frequency = 10; %Hz
> cfg.ntrials = 10;
> cfg.triallength = 20; % seconds
> cfg.fsample = 250; % Hz
>
> but when I try to esecute the line
>
> raw1 = ft_dipolesimulation(cfg);
>
> I find this error
>
> ??? Error using ==> ft_compute_leadfield at 301
> unsupported volume conductor model for MEG
>
> Error in ==> ft_dipolesimulation at 198
> lf = ft_compute_leadfield(dippos{trial}, sens, vol);
>
>
> I really cannot understand why volume conductor model is not supported.
> Any suggestion? I'm pretty sure that the mistake is trivial, but I'm
> not able to see it.
>
> Thank you!
> Dott.ssa Sara Rombetto
>
> Istituto di Cibernetica
> "E. Caianiello"
> Via Campi Flegrei, 34
> 80078 Pozzuoli (NA)
> Italy
> mob +39 3491530515
> tel +39 0818675361
> fax +39 0818675128
>
>
> "I disapprove of what you say, but I will defend to the death your
> right to say
> it." [Evelyn Beatrice Hall, The Friends Of Voltaire]
>
> ----------------------------------------------------------------
> This message was sent using IMP, the Internet Messaging Program.
>
>
>
> _______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip
>
More information about the fieldtrip
mailing list