[FieldTrip] how to use ft_stratify?
Vitória Magalhães Piai
vitoria.piai at gmail.com
Sun Jun 2 11:17:25 CEST 2013
I'm trying to use ft_stratify for the first time, but (it could be just
me) I don't find the help info helpful enough :)
What I want to achieve in the end is TFRs of two conditions for which
the histogram of the reaction time over trials for each condition is
If I understood ft_stratify correctly (and I doubt that), I could use
this function to select the trials for each condition such that the
histograms of the RTs match. Then knowing which trials to keep, I run
ft_freqanalysis on those specifically.
So question number 1, is that how I should proceed? 'Cause as far as I
can tell, ft_stratify will not take a whole raw data structure: The help
says "each input is a Nchan X Nobs matrix". So I have to go for the RTs
Assuming my approach is correct (ft_stratify on RTs of two conditions,
then move on with only those trials), I've made a matrix Nchan x
N_trials for each condition.
% input1 = 265 sensors x 95 RT_trials;
% input2 = 265 sensors x 100 RT_trials;
cfgst = ;
cfgst.method = 'histogram';
cfgst.equalbinavg = 'no';
cfgst.numbin = 4;
cfgst.numiter = 2000; % default
[output,bin] = ft_stratify(cfgst, input1, input2);
I then get an error in line 127:
linearhisto = zeros(ncond, cfg.numbin.^nchan);
??? Error using ==> zeros
Maximum variable size allowed by the program is exceeded.
Apparently, zeros(2, 4^265) is something matlab doesn't want to calculate!
Am I doing something wrong here? Has anyone worked with this function
before (with such a number of sensors)?
Any help is greatly appreciated!
More information about the fieldtrip