[FieldTrip] ft_sourceplot

qi li lihqih at gmail.com
Mon May 7 21:19:20 CEST 2012


Hi Yuval,

Thanks for your help but ft_sourceplot still can not show nii either.

Now it is showing the message'
Warning: no colorbar possible without functional data
> In ft_sourceplot at 774
the call to "ft_sourceplot" took 12 seconds and an estimated 15 MB
>> mri

mri =

          dim: [256 256 256]
      anatomy: [256x256x256 double]
          hdr: [1x1 struct]
    transform: [4x4 double]'

On Mon, May 7, 2012 at 2:03 PM, Yuval Harpaz <yuvharpaz at gmail.com> wrote:
> for work around try reading the nii with fieldtrip
> regards
> yuval
>
> On 7 May 2012 20:52, qi li <lihqih at gmail.com> wrote:
>>
>> Hi,
>>
>> I am having trouble following the tutorial of  'source reconstruction
>> of event-related fields using minimum-norm estimate'.
>>
>> So far, I have been successfully done with the freesurfer and am
>> checking the mri result by freesurfer.
>>
>> The command is like this,
>>
>> % go to the Subject01/mri directory
>> mri = ft_read_mri('filled.mgz');
>> cfg = [];
>> cfg.interactive = 'yes';
>> figure;ft_sourceplot(cfg, mri);
>>
>> ft_sourceplot shows no figures at all. I do check the 'filled.mgz by
>> converting it to nii and view it in afni. The white matter can be
>> clearly seen.
>>
>> Can anybody help? Thanks a lot!
>>
>> Qi
>> _______________________________________________
>> fieldtrip mailing list
>> fieldtrip at donders.ru.nl
>> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip
>
>
>
>
> --
>
> Y.Harpaz
>
> a link to the BIU MEG lab:
> http://faculty.biu.ac.il/~goldsa/index.html
>
>
> _______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip




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