[FieldTrip] Redefining trials, data is both raw and not raw...
Tom Marshall
t.marshall at fcdonders.ru.nl
Thu May 24 16:18:38 CEST 2012
Hi 'trippers...
So I'm having some trouble with the following pipeline:
Import and filter continuous data using ft_preprocessing
Create trial definition using ft_definetrial
Apply trial definition to imported, filtered data using ft_redefinetrial
(in case it helps, full code is below)
When I call ft_redefinetrial, it fails with:-
*??? Error using ==> ft_checkdata at 307
This function requires raw data as input.
Error in ==> ft_redefinetrial at 103
data = ft_checkdata(data, 'datatype', 'raw', 'feedback', cfg.feedback);*
However, when I check my data myself using ft_checkdata...
*ft_checkdata(data,'datatype','raw','feedback','yes')*
...the feedback it gives me is...
*the input is raw data with 2 channels and 1 trials*
...which is exactly what I'd expect. (There are only two channels
because I am just looking at my heog and veog data).
It seems that my zenlike data are both raw and not raw, depending on
whether ft_checkdata is called within ft_redefinetrial or by me. Any
ideas why it could be failing in the former case?
Best,
Tom
PS - full code here:-
*
% import eog data
veog_chan='UADC001';
heog_chan='UADC002';
cfg = [];
cfg.dataset = full_file;
cfg.channel = {heog_chan, veog_chan};
cfg.continuous = 'yes';
data = ft_preprocessing(cfg);
% define trials
cfg = [];
cfg.dataset = meg_file;
cfg.trialdef.prestim = -0.1; % ie 100ms after stim
cfg.trialdef.poststim = 5; % in seconds
cfg.trialdef.behavdata = fullfile(behav_file_dir, behav_file);
cfg.trialfun = 'trialfun_find_eog';
cfg = ft_definetrial(cfg);
% apply trial def to continuous data
data=ft_redefinetrial(data,cfg);*
--
Tom Marshall, MSc.
Neuronal Oscillations Group, Donders Centre for Cognitive Neuroimaging
tel: +31(0)243668487
email: t.marshall at fcdonders.ru.nl
postal: PO Box 9101, 6500HB, Nijmegen, The Netherlands
visiting: Kapittelweg 29, 6525EN, Nijmegen, The Netherlands
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