[FieldTrip] ft_sourceplot

qi li lihqih at gmail.com
Mon May 7 21:59:52 CEST 2012


Yes, I have the same problem with ft_sourceplot_old. No figures out.

On Mon, May 7, 2012 at 3:43 PM, Nathan Weisz <nathanweisz at mac.com> wrote:
> hi,
>
> do you encounter the same issue with ft_sourceplot_old? (the image in the tutorial looks like the old function, but i may be mistaken)
>
> good luck,
> n
>
> On 07.05.2012, at 21:19, qi li wrote:
>
>> Hi Yuval,
>>
>> Thanks for your help but ft_sourceplot still can not show nii either.
>>
>> Now it is showing the message'
>> Warning: no colorbar possible without functional data
>>> In ft_sourceplot at 774
>> the call to "ft_sourceplot" took 12 seconds and an estimated 15 MB
>>>> mri
>>
>> mri =
>>
>>          dim: [256 256 256]
>>      anatomy: [256x256x256 double]
>>          hdr: [1x1 struct]
>>    transform: [4x4 double]'
>>
>> On Mon, May 7, 2012 at 2:03 PM, Yuval Harpaz <yuvharpaz at gmail.com> wrote:
>>> for work around try reading the nii with fieldtrip
>>> regards
>>> yuval
>>>
>>> On 7 May 2012 20:52, qi li <lihqih at gmail.com> wrote:
>>>>
>>>> Hi,
>>>>
>>>> I am having trouble following the tutorial of  'source reconstruction
>>>> of event-related fields using minimum-norm estimate'.
>>>>
>>>> So far, I have been successfully done with the freesurfer and am
>>>> checking the mri result by freesurfer.
>>>>
>>>> The command is like this,
>>>>
>>>> % go to the Subject01/mri directory
>>>> mri = ft_read_mri('filled.mgz');
>>>> cfg = [];
>>>> cfg.interactive = 'yes';
>>>> figure;ft_sourceplot(cfg, mri);
>>>>
>>>> ft_sourceplot shows no figures at all. I do check the 'filled.mgz by
>>>> converting it to nii and view it in afni. The white matter can be
>>>> clearly seen.
>>>>
>>>> Can anybody help? Thanks a lot!
>>>>
>>>> Qi
>>>> _______________________________________________
>>>> fieldtrip mailing list
>>>> fieldtrip at donders.ru.nl
>>>> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip
>>>
>>>
>>>
>>>
>>> --
>>>
>>> Y.Harpaz
>>>
>>> a link to the BIU MEG lab:
>>> http://faculty.biu.ac.il/~goldsa/index.html
>>>
>>>
>>> _______________________________________________
>>> fieldtrip mailing list
>>> fieldtrip at donders.ru.nl
>>> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip
>>
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>
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