[FieldTrip] error ft_read_mri

[jan-mathijs schoffelen]

Hi Jan

I cannot reproduce your problem. I'd check the following and try again:
-ensure that you have the latest version of FieldTrip
-ensure that there are no pointers to any spm directory on your matlab-path (apart perhaps from those that are distributed within fieldtrip, i.e. fieldtrip/external/spmXXX)

Cheers,

Jan

On Mar 21, 2012, at 4:36 PM, <Jan.Hirschmann at med.uni-duesseldorf.de> <Jan.Hirschmann at med.uni-duesseldorf.de> wrote:

> Dear fieldtrip programmers,
>  
> with the latest version of fieldtrip I am experiencing problems reading MRs:
>  
> a=ft_read_mri('/data/apps/spm/spm8/canonical/avg152T1.nii')
> Undefined function or variable "out".
>  
> Error in fixname (line 55)
> while(out(1) == '_'),   out = out(2:end); end;   % remove all underscore at the begin of the
> string
>  
> Error in ft_hastoolbox (line 366)
>   previous.(fixname(toolbox)) = status;
>  
> Error in ft_read_mri (line 45)
> hasmri  = ft_hastoolbox('mri');     % from Darren Weber, see http://eeg.sourceforge.net/
>  
> Thanks and all the best,
> Jan
> --
> Jan Hirschmann
> MSc. Neuroscience
> Institute of Clinical Neuroscience and Medical Psychology
> Heinrich Heine University Duesseldorf
> Universitaetsstr.  1
> 40225  Duesseldorf
> Tel: 0049 - (0)211 - 81 - 18415
>  
> _______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
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Jan-Mathijs Schoffelen, MD PhD 

Donders Institute for Brain, Cognition and Behaviour, 
Centre for Cognitive Neuroimaging,
Radboud University Nijmegen, The Netherlands

Max Planck Institute for Psycholinguistics,
Nijmegen, The Netherlands

J.Schoffelen at donders.ru.nl
Telephone: +31-24-3614793

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