[FieldTrip] distributed computing with montecarlo clusterstatistics
Nick Ketz
nick.ketz at gmail.com
Thu Sep 22 21:28:08 CEST 2011
Hi list, thanks in advance for input that can be provided...
I'm working with a large data set involving all pairwise WPLI estimates
for a 128 surface electrode EEG experiment(8128 pairs), and I would
like to perform a 2 condition, within-subject time-frequency (and space
if that's possible) cluster analysis.
Given this I have a large number of possible clusters, I have been
getting on the order of 10,000 observed clusters(with a standard
clusteralpha of 0.05), which then leads to a lengthy randomization
test. What I'm wondering is if there's any way to run this in a
distributed way(peer-to-peer, or perhaps in parallel)? I could imagine
a single processor handling one iteration of the randomization test at a
time, however when I looked at the statistics_montecarlo.m file I saw no
quick way to implement this.
I've explored some ideas with 'parfor' loops but I wanted to get the
lists' input before I start rewriting statistics_monetcarlo.m. Has
anyone approached this problem thus far, and if so are there any
currently available resources?
thanks again...
Nick
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