[FieldTrip] Question about SPM brain templates including the cerebellum

[jan-mathijs schoffelen]

Dear May,

The surface files contain only a triangulation of the neo-cortical  
surface.
Typically, software packages creating high-resolution meshes of the  
brain (such as freesurfer) exclude the cerebellum.
For the figures in the famous Schoffelen et al 2008 paper (Neuroimage)  
I created the surfaces (with cerebellum) using a segmented template  
MRI (using SPM) and then, after some image processing (smoothing  
filling etc), called the matlab isosurface function. This gives a  
triangulated surface which can be used for visualization. Note that  
this procedure does not yield topologically a sphere, so it cannot be  
used for inflation.

Best,

Jan-Mathijs

On Apr 21, 2011, at 2:27 PM, May (Heng-Ru May TAN) wrote:

> Hi
>
> I was wondering if there exists within the folders of Fieldtrip,  
> surface source-plot MRI templates which includes the cerebellum, and  
> if not, how could one create a template which consists of the  
> cerebellum, too?
>
> Any help would be gratefully appreciated!
>
> Thanks.
> May
>
> _______________________________________________
> fieldtrip mailing list
> fieldtrip at donders.ru.nl
> http://mailman.science.ru.nl/mailman/listinfo/fieldtrip

Dr. J.M. (Jan-Mathijs) Schoffelen
Donders Institute for Brain, Cognition and Behaviour,
Centre for Cognitive Neuroimaging,
Radboud University Nijmegen, The Netherlands
J.Schoffelen at donders.ru.nl
Telephone: 0031-24-3614793

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.science.ru.nl/pipermail/fieldtrip/attachments/20110422/8df6e177/attachment-0001.html>