Dipoli issues

Vladimir Litvak v.litvak at ION.UCL.AC.UK
Wed Jul 21 13:36:52 CEST 2010


Dear Paul,

Note that there is also the bemcp toolbox distributed with Fieldtrip
that should be easy to compile on Linux. I compared it with OpenMEEG
on SPM canonical mesh and there are only differences for a small
number of vertices close to the boundary. According to Christophe
Phillips who wrote the toolbox as long as you stay more than one mesh
edge length away from the inner skull boundary there should be no
problem and it runs much faster than OpenMEEG (don't know about
dipoli).

Best,

Vladimir

On Wed, Jul 21, 2010 at 8:28 AM, Paul Czienskowski <paul_c at gmx.de> wrote:
> Dear all,
>
> I hope that somebody  is able to help me. I'm trying to generate a BEM model
> following the example script in
> http://fieldtrip.fcdonders.nl/example/create_bem_headmodel_for_eeg for my
> diploma thesis, but every time I'm running dipoli with more than 3
> compartments, the Program complains about double vertices on the innermost
> mesh. I first suspected a weird brain geometry to be the culprit, but I now
> tried to build the model with a simple sphere as the innermost compartment
> and the error remains, so this shouldn't be due to a weird geometry because
> there are few geometries as inoffensive as spheres. Has anybody an Idea or -
> alternatively - run OpenMEEG on an Ubuntu 9.04/64 Bit Intel system and could
> give me some hint how to build and run it?
>
> Thanks in advance,
> Paul
>
> --
> Paul Czienskowski
> Björnsonstr. 25
> 12163 Berlin
>
> Tel.: (+49)(0)30/221609359
> Handy: (+49)(0)1788378772
>
> ----------------------------------
> The aim of this list is to facilitate the discussion between users of the
> FieldTrip  toolbox, to share experiences and to discuss new ideas for MEG
> and EEG analysis. See also
> http://listserv.surfnet.nl/archives/fieldtrip.html and
> http://www.ru.nl/neuroimaging/fieldtrip.
>
>

----------------------------------
The aim of this list is to facilitate the discussion between users of the FieldTrip  toolbox, to share experiences and to discuss new ideas for MEG and EEG analysis. See also http://listserv.surfnet.nl/archives/fieldtrip.html and http://www.ru.nl/neuroimaging/fieldtrip.



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