how to plot the direction and amplitude of the planar gradient
Jim Li
megjim1 at GMAIL.COM
Fri Oct 2 06:07:18 CEST 2009
Dear all,
I want to view the direction and amplitude of the planar gradient near each
sensor location and create a plot like what's shown in the attached file (more
or less). Is it possible to do it? If so, how?
Our MEG sensors are 248 axial gradiometers. After running "megplanar" I got
A1_dH...A248_dH,A1_dV...A248_dV for my channels. If, say, in the plane
tangential to a given channel we have the Horizontal (x axis) and Vertical (y
axis) directions. Then for the channel of interest, say A1, I can run sqrt
(A1_dH^2+A1_dV^2) to get the amplitude of the planar gradient, and I can
run atan2(A1_dV,A1_dH)*180/pi) to get the angle between the field vector
and x-axis. What I'm not sure about is how fieldtrip defines the Horizontal (x
axis) and Vertical (y axis) for each channel (in a plane tangential to that
channel). So it's hard to create the plot I want...
Thanks a lot.
Jim
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