Problems with frequency analysis...
Carina Graversen
cgra05 at HST.AUC.DK
Thu Jun 5 14:13:34 CEST 2008
Hi.
I have a problem regarding the function "freqanalysis", that I hope
some of you can help me with.
I have a Neuroscan .avg file called testdata.avg, and I would like to
see a time-frequency plot of all the 64 channels.
___
In order to do this, I try the following:
cfg1 = [];
cfg1.datafile = 'testdata.avg'
cfg1.headerfile = 'testdata.avg'
dataFIC = preprocessing(cfg1);
This gives me the data in dataFIC, and if I look at the data in
dataFIC.trial{1} I get the correct data for all the 64 channels, so no
problem here :o).
___
The next I try is:
cfg2 = [];
cfg2.output = 'pow';
cfg2.channel = 'all';
cfg2.method = 'mtmconvol';
cfg2.taper = 'hanning';
cfg2.foi = 2:2:30;
cfg2.t_ftimwin = ones(length(cfg2.foi),1).*0.5;
cfg2.toi = 0.050:0.005:0.500;
TFRhann = freqanalysis(cfg2, dataFIC);
I would have expected to get the time-frequency coefficients in the
TFRhann.powspctrm, but all I get is a lot of NaNs :o(.
Am I doing something wrong, and should I set more parameters for the cfg2 ???
___
When the problem with the freqanalysis is solved, I expect to be able
to make the plots this way - does it look right (the testlay_64.lay
file is one I have generated myself, and if I just run the code with
the TFRhann with all the NaNs, at least the electrodes appear at the
right location in the plot.
cfg3.zparam = 'powspctrm';
cfg3.xlim = [0 0.5];
cfg3.ylim = [1 29];
cfg3.zlim = [-3e-27 3e-27];
cfg3.layout = 'testlay_64.lay';
cfg3.showlabels = 'yes';
multiplotTFR(cfg3, TFRhann)
___
I look forward to all suggestions regarding the problems with "freqanalysis".
Best regards,
Carina Graversen
Ph.D student at Aalborg Hospital, Denmark
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