problem w/ cfg.highlight using topoplot to show samples in sig clusters
Andrew Smart
andrew.smart at NYU.EDU
Fri Aug 24 18:41:10 CEST 2007
Hi,
I have run a cluster analysis comparing two conditions on channel data and have 1 pos significant
cluster and 1 negative significant cluster. When I run the following code from the tutorial to plot:
UNvsID=grandavgUN;
UNvsID.avg=UNvsID.avg-grandavgID.avg;
pos=stat.posclusterslabelmat==1;
neg=(stat.negclusterslabelmat==1)*(-1);
j = [0:0.05:0.5];
m = [1:15:301];
for k=1:10;
subplot(4,5,k);
cfg=[];
cfg.xlim=[j(k) j(k+1)];
pos_int = mean(pos(:,m(k):m(k+1))')';
neg_int = mean(neg(:,m(k):m(k+1))')';
cfg.highlight=find(pos_int==1|neg_int==-1);
cfg.comment = 'xlim';
cfg.commentpos = 'title';
cfg.layout = 'CTF275.lay';
topoplotER(cfg,UNvsID)
end
the raw effect is plotting but the samples belonging to the significant clusters are not highlighted,
as on the tutorial page. So I can't tell when and where the effect is.
When looking at the topoplot function cfg.highlight does not appear to be an option anywhere.
Do I need a newer version of Fieldtrip? The one I am using now is from 2007/08/01.
Thanks for any help!
andy
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