<div dir="ltr">Hi Paolo and other experts,<div><br></div><div>If it is convenient, could you please give a sample script or a bit of detailed instruction on the procedure below, </div><div><span style="color:rgb(0,0,0);white-space:pre-wrap">2) you generate a low-resolution version of the Conte69 atlas using HCP-workbench, using the same spherical template meshes (mapping the 164k per hemisphere to the 8k per hemisphere meshes), and apply a ’subparcellation’ scheme to chop up the large Brodmann areas in smaller chunks, which was specified here, </span><a href="https://mailman.science.ru.nl/pipermail/fieldtrip/2021-March/040784.html">https://mailman.science.ru.nl/pipermail/fieldtrip/2021-March/040784.html</a>. </div><div><br></div><div>I appreciate it a lot in advance.</div><div><br></div><div>best,</div><div>Fan</div><div><div><br></div><div><br></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, 8 May 2023 at 14:50, Puluto Go <<a href="mailto:gopuluto@gmail.com">gopuluto@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hi Paolo,<div><br></div><div>Thanks a lot for your quick reply. Could you please send me the link to download the Glasser Atlas? </div><div><br></div><div>best,</div><div>Fan</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, 8 May 2023 at 14:25, Paolo Belardinelli <<a href="mailto:paolo.belardinelli@gmail.com" target="_blank">paolo.belardinelli@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div class="gmail_default" style="font-size:large">Hi Fan.</div><div class="gmail_default" style="font-size:large"><br></div><div class="gmail_default" style="font-size:large">You can get the freesurfer generated mesh of the Glasser Atlas from the webpage of the van Essen et al. paper and decimate that consistently with the sourcemodel through the ft_postfreesurferscript.</div><div class="gmail_default" style="font-size:large"><br></div><div class="gmail_default" style="font-size:large">Best,</div><div class="gmail_default" style="font-size:large"><br></div><div class="gmail_default" style="font-size:large">Paolo</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, May 8, 2023 at 2:04 PM Puluto Go via fieldtrip <<a href="mailto:fieldtrip@science.ru.nl" target="_blank">fieldtrip@science.ru.nl</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Dear FT experts,<div><br></div><div>Hope you all are doing well. I used the standard pipeline, <a href="https://urldefense.com/v3/__https://www.fieldtriptoolbox.org/tutorial/sourcemodel/__;!!HJOPV4FYYWzcc1jazlU!_hjVO1VbUWG0broPdCxr7Xqn2ppQIvubNCHuUYo04PEDDWmABEcO5XV2tM_Gl1QGRDW3hBeXdouBSg2J8PsX0A$" target="_blank">https://www.fieldtriptoolbox.org/tutorial/sourcemodel/</a>, to generate a source mesh for each of my participants. The procedure resulted in a 15684 vertices mesh for each participant. My questions are as follows.</div><div><br></div><div>1), If there is an atlas corresponding to the 15684 vertices mesh in the workbench output. If so, could you please tell me how it is named?  May I use ft_read_atlas to read it? </div><div><br></div><div>2), the second one relates to the thread here, <a href="https://mailman.science.ru.nl/pipermail/fieldtrip/2021-March/040784.html" target="_blank">https://mailman.science.ru.nl/pipermail/fieldtrip/2021-March/040784.html</a>, in which (the second solution) you specified the procedure to extract an atlas for source mesh with 15684 vertices, could you please elaborate it a little bit on how to do this? or are there template scripts in FT toolbox to do this? </div><div><br></div><div>Thanks a lot for your help in advance. </div><div><br></div><div>best,</div><div>Fan</div></div>
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<a href="https://urldefense.com/v3/__https://doi.org/10.1371/journal.pcbi.1002202__;!!HJOPV4FYYWzcc1jazlU!8o5bWSs-Q5oCITgwuFIpGSP8tWlUR1vk7HgiKeSqfVBVlF1lk0M5pc6CxgULPuM1rUEd4DR_CDn-bxvCbvGWUA$" rel="noreferrer" target="_blank">https://doi.org/10.1371/journal.pcbi.1002202</a><br>
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