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Hi Cihan,
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<div class="">I don’t understand the question. Also, I don’t understand what you mean with ‘defining a ROI in cfg.neighbours’.</div>
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<div class="">Do you want to</div>
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<div class="">1. constrain for each time point the set of channels that enter into the clustering algorithm?</div>
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<div class="">or </div>
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<div class="">2. use a different spatial neighbourhood matrix for each time point?</div>
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<div class="">These are two different things I think.</div>
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<div class="">Best wishes,</div>
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<div class="">Jan-Mathijs</div>
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<div class="">On 19 May 2021, at 13:04, Cihan Dogan <<a href="mailto:CDogan1994@hotmail.co.uk" class="">CDogan1994@hotmail.co.uk</a>> wrote:</div>
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Dear FT,<br class="">
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Currently I have an experiment setup to run a cluster-based permutation tests on time-frequency data regressing against some behavioural variables using the<span class="Apple-converted-space"> </span><b class="">ft_statfun_indepsampleregrT</b><span class="Apple-converted-space"> </span>function.<br class="">
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I have a prior precedent for using a particular ROI which I have defined in cfg.neighbours, however, I wish to change this ROI dynamically through time. So essentially for each timestep get the set of neighbours and use this to cluster at that point in time
rather than apply a static ROI for the entire duration.<br class="">
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I was wondering if in FieldTrip it is possible to apply a dynamic region of interest through time? And if not, how much of a job it would be to make this addition myself.<br class="">
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I’ve started to look at some of the underlying code such as clusterstat.m and findcluster.m to make this addition /amendment and was wondering if anyone in the community has made such a change.<br class="">
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Many thanks,<br class="">
Cihan<o:p class=""></o:p></div>
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<span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class="">_______________________________________________</span><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class="">fieldtrip
mailing list</span><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<a href="https://mailman.science.ru.nl/mailman/listinfo/fieldtrip" style="font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">https://mailman.science.ru.nl/mailman/listinfo/fieldtrip</a><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<a href="https://urldefense.com/v3/__https://doi.org/10.1371/journal.pcbi.1002202__;!!HJOPV4FYYWzcc1jazlU!r6QEjALJvF3ICw4grX-kFnt5Oxhwfbzf7K48sclvFI815gxNw3oIE4PTHQKZw0F1Ppk0d2mC$" style="font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">https://urldefense.com/v3/__https://doi.org/10.1371/journal.pcbi.1002202__;!!HJOPV4FYYWzcc1jazlU!r6QEjALJvF3ICw4grX-kFnt5Oxhwfbzf7K48sclvFI815gxNw3oIE4PTHQKZw0F1Ppk0d2mC$</a><span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class=""></span></div>
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