<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
</head>
<body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">
<font size="4" class="">Hi Matt,</font>
<div class=""><font size="4" class=""><br class="">
</font></div>
<div class=""><font size="4" class="">I believe that Georgios has already answered this question on the HCP mailing list. If there were things unclear, I suggest following up there in order to avoid confusion (and double work).</font></div>
<div class=""><font size="4" class=""><br class="">
</font></div>
<div class=""><font size="4" class="">Best wishes,</font></div>
<div class=""><font size="4" class="">Jan-Mathijs</font></div>
<div class=""><font size="4" class=""><br class="">
</font>
<div><br class="">
<blockquote type="cite" class="">
<div class="">On 13 Sep 2020, at 03:36, Winter, Matthew <<a href="mailto:mattwint@iu.edu" class="">mattwint@iu.edu</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div class="WordSection1" style="page: WordSection1; caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;">
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class="">Hi everyone, </span><o:p class=""></o:p></div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class=""><o:p class=""> </o:p></span></div>
</div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class="">I am trying to do a walk through of the tmegconnebasic pipeline so that I can translate it over into MNE-Python. I can see I need to start with the tmegpreproc files (working memory
task) but I am not sure how to get the list of contrasts to actually start the tmegconnebasic pipeline. Would any of you be willing to give me the first few very basic steps to help get me started? I have the 'WU-Minn HCP 1200 Subjects Data Release Reference
Manual,' and am trying to follow the “Main Steps” on page 186, I just can’t seem to get the<span class="Apple-converted-space"> </span></span><span class="fontstyle01" style="font-family: ArialMT, serif; font-weight: normal; font-style: normal;">function hcp_tmegconnebasic_contrasts.m</span><span class="Apple-converted-space"> </span><span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class="">to
give me anything but errors, because I have no idea what it needs as input and if there are other steps that need to be done first. <o:p class=""></o:p></span></div>
</div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class=""> <o:p class=""></o:p></span></div>
</div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class="">I should add that I am working off of my school's server which already has all the HCP data downloaded. <o:p class=""></o:p></span></div>
</div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class=""><o:p class=""> </o:p></span></div>
</div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class="">Thank you for any advice or resources you can offer,<o:p class=""></o:p></span></div>
</div>
<div class="">
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<span style="font-size: 10.5pt; font-family: Helvetica, sans-serif;" class="">Matt<o:p class=""></o:p></span></div>
</div>
</div>
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<o:p class=""> </o:p></div>
<div style="margin: 0in; font-size: 11pt; font-family: Calibri, sans-serif;" class="">
<o:p class=""> </o:p></div>
</div>
<span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class="">_______________________________________________</span><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class="">fieldtrip
mailing list</span><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<a href="https://mailman.science.ru.nl/mailman/listinfo/fieldtrip" style="font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">https://mailman.science.ru.nl/mailman/listinfo/fieldtrip</a><br style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">
<a href="https://doi.org/10.1371/journal.pcbi.1002202" style="font-family: Helvetica; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;" class="">https://doi.org/10.1371/journal.pcbi.1002202</a></div>
</blockquote>
</div>
<br class="">
</div>
</body>
</html>